Basic Statistics
Measure | Value |
---|---|
Filename | HV2Y7BGXG_n01_col4-0.5_HPK-2S.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 3226191 |
Sequences flagged as poor quality | 0 |
Sequence length | 76 |
%GC | 37 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGGATAG | 1225 | 0.0 | 59.998886 | 5 |
CAGATAG | 1705 | 0.0 | 57.476936 | 5 |
CGGGATA | 1080 | 0.0 | 57.360046 | 4 |
GGATAGT | 2310 | 0.0 | 57.27166 | 6 |
ACGATAG | 945 | 0.0 | 57.03598 | 5 |
GATAGTC | 1210 | 0.0 | 56.403034 | 7 |
CGATAGG | 1260 | 0.0 | 56.11007 | 6 |
GGGATAG | 2070 | 0.0 | 55.96514 | 5 |
CCGATAA | 1010 | 0.0 | 55.791042 | 5 |
GGGGATA | 1925 | 0.0 | 54.180813 | 4 |
CGATAGT | 1055 | 0.0 | 54.07482 | 6 |
GATAGGG | 1945 | 0.0 | 53.982735 | 7 |
GGATAGG | 2375 | 0.0 | 53.78847 | 6 |
CCTGATA | 945 | 0.0 | 53.332344 | 4 |
GCCGATA | 690 | 0.0 | 53.25988 | 4 |
CGCGATA | 585 | 0.0 | 53.246872 | 4 |
CCCGATA | 585 | 0.0 | 53.246872 | 4 |
GATAGGT | 2465 | 0.0 | 53.243618 | 7 |
GTGATAG | 2335 | 0.0 | 53.06111 | 5 |
TGATAGG | 2225 | 0.0 | 52.852947 | 6 |