HV2TMBGXB_n01_undetermined.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HV2TMBGXB_n01_undetermined.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	18907284
Sequences flagged as poor quality	0
Sequence length	76
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	165211	0.8737955171139334	No Hit
TTGTACTCTAGTTGTTACCTCTAATGCTGGACACCTACTATCTAACCTCT	83118	0.4396083541136845	No Hit
TTTCCACCTTAGAGTACAAACGGAACACGAGAATTTTTACCCTACAGAGT	78257	0.41389868581865064	No Hit
CTGTTACTACCCTACACTCATACTTGGATCACAGCCACTAGTAGCCTATG	52460	0.27745920566909554	No Hit
TTGTACTCTAGTTGTTACCTCTAATGCTGGACACCTGATAGTCCTACAGA	51370	0.27169423170456425	No Hit
CCACCTTAGAGTACAAACGGAACACGAGAATTTTTACCCTACAGAGTAAC	51107	0.2703032333993608	No Hit
TTCCACCTTAGAGTACAAACGGAACACGAGAATTTTTACCCTACAGAGTA	47275	0.25003591208552217	No Hit
CTTAGAGTACAAACGGAACACGAGAATTTTTACCCTACAGAGTAACCTAG	44093	0.23320641928264257	No Hit
CCTTAGAGTACAAACGGAACACGAGAATTTTTACCCTACAGAGTAACCTA	42387	0.22418344168311008	No Hit
TTTTTCCACCTTAGAGTACAAACGGAACACGAGAATTTTTACCCTACAGA	36152	0.1912067328126028	No Hit
GTTACCTCTAATGCTGGACACCTGATAGTCCTACAGAGGTTAGATAGTAG	28795	0.1522958030354862	No Hit
CCTACACTCATACTTGGATCACAGCCACTAGTAGCCTATGCTCCTAGTAC	27110	0.14338389374169236	No Hit
CTAGTTGTTACCTCTAATGCTGGACACCTGATAGTCCTACAGAGGTTAGA	25775	0.13632312287687645	No Hit
CTCTAATGCTGGACACCTGATAGTCCTACAGAGGTTAGATAGTAGGACTG	24402	0.12906137126834294	No Hit
CGGAACACGAGAATTTTTACCCTACAGAGTAACCTAGATTGATCAAACAG	24257	0.12829447106205205	No Hit
TCCACCTTAGAGTACAAACGGAACACGAGAATTTTTACCCTACAGAGTAA	23718	0.12544371788142603	No Hit
GTACAAACGGAACACGAGAATTTTTACCCTACAGAGTAACCTAGATTGAT	22770	0.12042977722236572	No Hit
TGATCCAAGTATGAGTGTAGGGTAGTAACAGCACCTGATAGTCCTACAGA	20103	0.10632410239355373	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TTGTACT	19155	60.461098	1
TGTACTC	20040	58.934784	2
GTACTCT	21575	55.12844	3
TACTCTA	22245	53.772346	4
ACTCTAG	22330	53.708584	5
GATACGG	1695	53.63422	4
ATACGGC	1740	52.247128	5
TAGGGAA	2540	51.33663	1
CTCTAGT	23240	51.259224	6
TGATACG	1810	50.42917	3
TCTAGTT	23815	49.990646	7
TACGGCG	1880	48.728096	6
GTTACTA	9705	44.070786	3
TTTTTCC	6550	44.04298	1
CTAGTTG	27365	43.211605	8
TAATACG	2190	42.629032	4
AGGGAAG	3340	40.966225	2
GATCTAC	2135	40.9655	21
CAGTCAC	1630	40.368423	27
TCTACAC	2195	40.170322	23