HTW7MBGXG_n01_pIXHALO_PN94-B_r2.fastq.gz FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	HTW7MBGXG_n01_pIXHALO_PN94-B_r2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	6612998
Sequences flagged as poor quality	0
Sequence length	76
%GC	39

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGCCGTC	605	0.0	13.305567	50
GCCGTCT	485	3.1941454E-9	11.546202	51
TATGCCG	765	0.0	10.980213	48
ATGCCGT	850	5.456968E-12	9.470433	49
CGTATGC	940	0.0	9.308358	46
TATCTCG	1420	0.0	7.8871946	41
CGCTCAT	1510	0.0	7.880665	34
CCGCTCA	1490	0.0	7.7515507	33
ACCGCTC	1455	0.0	7.6974688	32
TCACCGC	1755	0.0	6.7805157	30
CACCGCT	1570	3.6379788E-12	6.6877885	31
CTCGTAT	1310	2.7083843E-7	5.877766	44
TCTCGTA	1685	1.1095835E-9	5.815928	43
CCGTCTT	1030	4.3651293E-5	5.776604	52
GTATGCC	1735	2.2591848E-9	5.648322	47
TCGTATG	1500	6.4493724E-7	5.3665786	45
GTCACCG	1965	1.4842954E-9	5.343424	29
ACACGTC	6015	0.0	5.1786346	70
ATCTCGT	1955	3.9390216E-8	5.012705	42