HTVC5BGX9_n01_JH96_MTS30mS2_N.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HTVC5BGX9_n01_JH96_MTS30mS2_N.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4328165
Sequences flagged as poor quality	0
Sequence length	76
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGGATAG	1180	60.20904	5
GTATAGG	4525	59.245842	6
TTATAGG	5310	59.12152	6
CTTATAG	2670	58.06844	5
CGTATAG	2310	57.270042	5
CTATAGG	3210	56.804195	6
TCTACGG	1215	56.744343	7
TATAGGG	5500	56.568115	7
CGTATAA	1845	56.338825	5
TATAGGT	5790	55.729477	7
GGTATAG	3935	55.677185	5
CATATAG	3420	54.23722	5
TATAGGC	3390	54.199123	7
GTTATAG	4905	53.728367	5
GCGATAG	1370	53.64712	5
CCTATAC	760	53.418545	5
TTTATAG	5420	53.336987	5
TTATAGT	5475	53.31257	6
TTATAAG	3995	53.176483	6
CGATAGG	1240	53.06203	6