HTKZQN1rc_l02_n02_undetermined.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HTKZQN1rc_l02_n02_undetermined.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	15871350
Sequences flagged as poor quality	0
Sequence length	101
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTATGAGTACGATATATACTGAAACGAAAACGTTCTAATCTCTTGTTCC	23538	0.1483049646060354	No Hit
CGTACGTCTACTACTCTACTGTTCCTCTCGATATTCTTCCCTCATAGACT	21534	0.1356784394522205	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTGTAT	66675	93.27621	1
AGTACGA	102330	91.80172	7
GAGTACG	102520	91.79375	6
TGTCGCG	26015	90.36253	3
CGCGTCA	25380	90.358505	6
GCGCACT	25695	90.30448	7
CGTCGTA	20490	90.08564	1
CGTGTCG	48070	89.88165	1
CGTATGT	46960	89.78089	1
GTGTCGC	26605	89.697655	2
GTACGAT	104645	89.56658	8
GCGCGTC	25980	89.53324	5
CGACTAT	34445	89.4704	1
TCGCGCG	26435	89.42997	3
CGCGCGT	26130	89.34676	4
CGCGCAC	26055	89.31198	6
GTATGAG	107810	88.889244	2
CACGTCG	30760	88.8697	4
CGAGATG	21935	88.698654	1
ATGAGTA	106390	88.66928	4