HTKZQN1rc_l02_n01_undetermined.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HTKZQN1rc_l02_n01_undetermined.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	15871350
Sequences flagged as poor quality	0
Sequence length	101
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTACGTCTACTACTCTACTGTTCCTCTCGATATTCTTCCCTCATAGACT	22014	0.13870275685433187	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTGTAT	68280	93.751816	1
AGTACGA	105160	92.20714	7
CGTCGTA	18655	92.15361	1
GAGTACG	105500	91.99045	6
CGACTAT	31935	91.45928	1
GTACGAT	107220	90.34312	8
CGTGTCG	43385	90.27802	1
CGCGCGT	24995	90.13083	4
CGTATGT	47095	89.868416	1
CGCGTCA	25025	89.85422	6
GCGCGTC	25075	89.82659	5
TCGCGCG	25270	89.5447	3
TGTCGCG	24770	89.51137	3
CGAGATG	19680	89.28922	1
GCGCACT	24680	89.243996	7
CGCGTCT	6310	89.18016	1
GTATGAG	109810	89.13025	2
GTGTCGC	24995	89.066666	2
TGAGTAC	109120	88.99966	5
GTGTATA	71855	88.914154	2