HTKZQN1rc_l01_n02_undetermined.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HTKZQN1rc_l01_n02_undetermined.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	12557126
Sequences flagged as poor quality	0
Sequence length	101
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTATGAGTACGATATATACTGAAACGAAAACGTTCTAATCTCTTGTTCC	23468	0.1868898982139703	No Hit
CGTACGTCTACTACTCTACTGTTCCTCTCGATATTCTTCCCTCATAGACT	21101	0.16804004355773766	No Hit
CGAGACGATGTGTACGTACTACGCGTGATCAGTAGAAACAAGGGTGTTTT	15055	0.11989208358664236	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTGTAT	65705	93.65533	1
GAGTACG	100530	92.094124	6
AGTACGA	100515	92.055885	7
CGTATAG	63865	91.80926	1
GCGCGTC	23860	91.67537	5
CGCGTCA	23670	90.986465	6
TGTCGCG	24410	90.89408	3
TCGCGCG	24450	90.84252	3
GTGTCGC	24800	90.747955	2
CGACTAT	33670	90.7395	1
TCACGTC	29260	90.633095	3
CGCGCGT	24120	90.62808	4
CACGTCG	29025	90.53227	4
CGTGTCG	41565	90.303116	1
GCGCACT	24305	90.25095	7
CGCGCAC	24355	90.18269	6
GTACGAT	102450	90.14102	8
ATGAGTA	103155	90.105156	4
CGTCGTA	17470	89.91556	1
GTATGAG	105230	89.80445	2