FastQCFastQC Report
Wed 3 Apr 2019
HTKZQN1_l02_n02_BC351CG_2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHTKZQN1_l02_n02_BC351CG_2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32
Sequences flagged as poor quality0
Sequence length101
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGCGCGATACACGTGACGACGCCCCCCAAAGGAGTGGAGGAAAGTTCCAT13.125No Hit
CGCGCGATACACGTGACGACGCGGGGGAACAATTAGGTCAGAAGTTTGAA13.125No Hit
TGCGCGATACACGTGACGACGCGCGAGGCGCGTGATCAGTAGAAACAAGG13.125No Hit
CACGCGATACACGTGACGACGCTCGGTTCGAATCCATCCACATAGGCTCT13.125No Hit
CGCGCGATACACGGGACGAGGCAGGACATTGAGAATGGGGGGGAAAATCC13.125No Hit
CGCGCGATACACGTGACGACGCAGGTACAGAGGCCATGGTCATTTTAAGT13.125No Hit
CGAGCGATACACGTGACGACGCAGTGCTGGAGTACTCATCTACACCCGTT13.125No Hit
CGCGCGATACACGTGACGACGCACAAGCAGAATAACTGAGTGAGATTTCT13.125No Hit
CGTGCGATACACGTGACGACGCGAGGACGAAAAACAAGAATTGCTTATGA13.125No Hit
CGCGCGATACACGTGACGACGCGAACAAACAAGGTGAACACTGTTATCGA13.125No Hit
CGCGCGATACACGTGACGACGCACCAGCACGATAACTGAGTGAGATTTCT13.125No Hit
CGCGCGATACACGTGACGACGCAAGGCCAGAAGAGACTCACCGGTCTCGG13.125No Hit
CACGCGATACACGTGACGACGCAACGGAAAACTATGTAGATTAAAAGGAA13.125No Hit
CGCGGGATACACGTGACGACGCCGGGGACCAACACTGATTCAGGACCATT13.125No Hit
CACGCGATACACGTGACGACGCAGTCGACTCGAACTGTGTTATCATTCCA13.125No Hit
CACGCGATACACGTGACGACGCAAGAAGACAAGAGAAATGGGCCAGCACT13.125No Hit
CGGGCGATACACGTGACGACGCCGTTGCATCGTCACCATTATTAGCTTGG13.125No Hit
CGCGCGATACACGTGACGACGCGGGGCCAAAAGTCACAGTTCCAGACATG13.125No Hit
CGCGCGATACACGTGACGACGCCAAAAGGCAATTAAAGAATAATGCCAAA13.125No Hit
CGCGCGATACACGTGACGACGCACCGGCTGGTCTGACTCACATCCTGGGG13.125No Hit
CGCGCGATACACGTGACGACGCCACAGCGGAAAACTATGTAGATTAAAAG13.125No Hit
CGCGCGATACACGTGACGACGCCAGCCCATGCCATCATGACATGCACTTG13.125No Hit
CACGCGATACACGTGACGACGCAGGACCAAAAGTCACAGTTCCAGACATG13.125No Hit
CTCGCGATACACGTGACGACGCGGGGGGCCAAAGAAATCTCACTCAGTTA13.125No Hit
CGCGCGATACACGTGACGACGCAAGACCCAAAGCCTCTACTCAGTGCGAA13.125No Hit
CTCGCGATACACGTGACGACGCAGCACCTGCGGCTCCAGACCTCCTAGGG13.125No Hit
CGCGCGATACACGTGACGACGCCAAAGAGGAAATGTACATTTCCTCGTTG13.125No Hit
CACGCGATACACGGGACGACGCGAGAACGGAAAAGCGTTGCGGGGAGAAA13.125No Hit
CCCGCGATACACGTGACGACGCCACACCGGAAAACTATGTAGATTAAAAG13.125No Hit
CGCGCGATACACGTGACGACGCGAAAAGGGAAAGAAGTCCTTGTACTGTG13.125No Hit
CGCGCGATACACGTGACGACGCGGGATGCGCGTGATCAGTAGAAACAAGG13.125No Hit
CTGGCGATACACGTGACGACGCGAGGAGGGAAGAAGTTTTATTATCTGTG13.125No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers