HTKZQN1_l02_n01_BC307CG_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HTKZQN1_l02_n01_BC307CG_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7894
Sequences flagged as poor quality	0
Sequence length	101
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGACATACAGAGTAGTACAGACAGGCCCCCTCAAAGCCGAGATCGCGCAG	19	0.24068913098555864	No Hit
CGACATACAGAGTAGTACAGACGGGGGGGGAACGCCAGGATGCCACAGAA	17	0.21535343298707882	No Hit
CGACATACAGAGTAGTACAGACGGGGGGAAAATGGACGAAGGACAAGGGT	10	0.12667848999239928	No Hit
CGACATACAGAGTAGTACAGACCGGCGCTGGAGCTAGGATGAGTCCCAAT	10	0.12667848999239928	No Hit
CGACATACAGAGTAGTACAGACGGGGGGGGAACAGTGACCACAGAAGCTG	9	0.11401064099315936	No Hit
CGACATACAGAGTAGTACAGACAGGAGCCCATATCGAACCCTAATGAGCT	8	0.10134279199391943	No Hit
CGACATACAGAGTAGTACAGACAGGAGCATTCCTCATAGTGATAATTAGG	8	0.10134279199391943	No Hit
CGACATACAGAGTAGTACAGACGGGGGGAGAAGCTTTCAGTCTCGTACCA	8	0.10134279199391943	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GACATAT	20	1.6377318E-5	95.00001	2
ACATATA	20	1.6377318E-5	95.00001	3
ATAGAGT	20	1.6377318E-5	95.00001	7
TAGAGTA	20	1.6377318E-5	95.00001	8
CATATAG	20	1.6377318E-5	95.00001	4
TATAGAG	20	1.6377318E-5	95.00001	6
CGATATA	15	6.373673E-4	95.0	1
TATACAG	15	6.373673E-4	95.0	4
GATATAC	15	6.373673E-4	95.0	2
AGAGTAG	795	0.0	89.62264	9
ACAGAGT	780	0.0	89.519226	7
CAGAGTA	775	0.0	89.48387	8
TACAGAG	800	0.0	89.0625	6
ATACAGA	780	0.0	88.910255	5
CATACAG	770	0.0	88.83117	4
CGACATA	765	0.0	88.79085	1
GACATAC	755	0.0	88.70861	2
ACATACA	760	0.0	88.125	3
ATATAGA	25	4.9557315E-5	76.0	5
AGAGGAG	20	0.0019979486	71.25	9