FastQCFastQC Report
Fri 15 Feb 2019
HTJYVBGX9_n02_Sample_21.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHTJYVBGX9_n02_Sample_21.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences103181
Sequences flagged as poor quality0
Sequence length151
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCCGTA300.001929729172.510185145
TAGAGGT350.00356230162.121464
TCTTAGA350.00356230162.121462
CCGATAC805.8358273E-754.3562743
CCTAACC400.006043802554.3562748
GTGTAGG450.00960948748.3401221
GGAGTTT604.9327157E-448.3166926
CGATACC850.00273526834.10594
TTTACCA900.0036193832.211134
GCCTGCG1751.2480008E-424.8485838
GGTGGGG2900.003355296615.002107145
GGGGGGG149050.09.778294145
AAAAAGG9753.2761127E-69.668025145
AGGGGGG7055.456968E-127.199593145
TGGGGGG4302.0370862E-87.0858264135-139
GGGGGTG2100.00638767156.907742140-144
AAAAGGG7604.651156E-86.67857145
GTGGGGG2955.825946E-46.393829135-139
AAGGGGG6908.021743E-105.88774135-139
TATCATT18953.0771038E-45.7395926145
Produced by FastQC (version 0.11.5)