FastQCFastQC Report
Fri 15 Feb 2019
HTJYVBGX9_n01_Sample_201.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHTJYVBGX9_n01_Sample_201.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37328
Sequences flagged as poor quality0
Sequence length151
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAGAGTA100.0070777903144.903492
ACAGAGG100.0070777903144.903496
TAGATCA100.0070777903144.903494
AGAGGGT100.0070777903144.903498
GATCAGA350.003549000262.1014981
AGGCGAC400.00602133954.3388067
TCGTATT955.564052E-412.202399115-119
AAAGGGG3051.5761421E-59.514622145
CGTATTC1250.00546905449.273823115-119
GGGGGGG96100.08.077776145
AAAAGGG3500.0045175046.2184854145
AAAAAAG5408.881607E-65.366796140-144
Produced by FastQC (version 0.11.5)