FastQCFastQC Report
Fri 15 Feb 2019
HTJYVBGX9_n01_Sample_14.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHTJYVBGX9_n01_Sample_14.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12133769
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTATAC47300.015.4811293
GTATATA194200.014.4135161
GTCCTAG61650.014.1149721
GTATAGA78700.014.0977111
TATACCG12200.013.6681715
GTGTATA135750.013.6217291
GTATTAG82550.013.5280611
TATACTG106900.013.2929325
GTCTAAG63900.013.0505521
CTATACT79450.012.7754594
GTATAAG74250.012.6963461
GCTATAC43150.012.6015183
TACACTG111000.012.5406685
GTATAGG50850.012.2642041
CTAATAC85800.012.2524543
TATACAG109250.012.21064955
CTAGGAC59850.011.9926013
CTATACC54750.011.9179294
CCTAGAC66350.011.9104433
GTATTAC66800.011.8326471
Produced by FastQC (version 0.11.5)