FastQCFastQC Report
Mon 1 Mar 2021
HTJTLBGXH_n02_dpr197.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHTJTLBGXH_n02_dpr197.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12469566
Sequences flagged as poor quality0
Sequence length76
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGG3095082.4821072361299503No Hit
CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACC1875591.5041341454866994No Hit
GGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGCTGTCTCTTATACACAT557320.44694418394353097No Hit
CCCTAACCCTAACCCTAACCCTAACCCTAACCCCTGTCTCTTATACACAT535840.42971824360206284No Hit
CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCCTGTCTCTTAT451560.36212968438516624No Hit
GGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGCTGTCTCTTAT440890.3535728508915226No Hit
GGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGCTGTC371770.2981418920273568No Hit
GGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGATAGG325210.26080298223691184No Hit
CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCCTGTC289960.23253415555922313No Hit
GGGTTAGGGTTAGGGTTAGGGTTAGGGCTGTCTCTTATACACATCTGACG232120.1861492212319178No Hit
GGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGATAGGGTTAGGGTTAGG212750.1706154007284616No Hit
CCCTAACCCTAACCCTAACCCTAACCCCTGTCTCTTATACACATCTGACG198040.15881867901416938No Hit
GGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGG195310.156629348607642No Hit
GGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGGTAGGGTTAGGGTTAGG193980.15556275174292353No Hit
GGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGGTAGG187070.1500212597615667No Hit
CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACA174650.14006100934066187No Hit
CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCAAACC172820.13859343621101167No Hit
GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAGTTTTCTCGCCA154980.12428660307824667No Hit
CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAAAC152950.12265863944262376No Hit
ACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAAC142770.11449476268861324No Hit
GATATACACTGTTCTACAAATCCCGTTTCCAACGAATGTGTTTTTCAGTG132460.10622663210572043No Hit
GGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGATAGGGTTAGG124850.10012377335345912No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)