FastQCFastQC Report
Mon 1 Mar 2021
HTJTLBGXH_n02_dpr193.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHTJTLBGXH_n02_dpr193.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10712869
Sequences flagged as poor quality0
Sequence length76
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGG1234081.151960319873229No Hit
CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACC775190.7236063467218725No Hit
GGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGATAGG137020.12790224542090453No Hit
CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCAAACC126690.11825963707761199No Hit
GGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGCTGTCTCTTATACACAT120980.11292959897110662No Hit
CTGTCTCTTATACACATCTGACGCTGCCGACGACCGCATGTGTGTAGATC115370.10769290654072218No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)