FastQCFastQC Report
Mon 1 Mar 2021
HTJTLBGXH_n02_dpr191.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHTJTLBGXH_n02_dpr191.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences736031
Sequences flagged as poor quality0
Sequence length76
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCATATAAGCTAGTACATTAAATCAATGGTTCAGGTCATAAAATAATCAT14820.20135021486866722No Hit
GTACAACAGTACATTTATGTATATCGTACATTAAACTATTTTCCCCAAGC10690.14523844783711556No Hit
CGTCTAGACTGTGTGCTGTCCTTTCATGCCTTGACGGCTATGTTGATGAA10610.1441515370955843No Hit
TGCTTACACCACATGAAACACTGTCTCTTCTATAGGATCATTTATTTCAC8060.10950625720927516No Hit
CCCCTATACTATATCAATTTACCAGAACTCTACTCAACTAACTTCATAAT7990.1085552103104353No Hit
CTCTTAGGGTTGGTAAATTTCGTGCCAGCCACCGCGGTCATACGATTAAC7420.10081097127702503No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)