FastQCFastQC Report
Mon 1 Mar 2021
HTJTLBGXH_n02_dpr190.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHTJTLBGXH_n02_dpr190.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2297429
Sequences flagged as poor quality0
Sequence length76
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGG297571.2952304510824928No Hit
CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACC171180.7450937548015629No Hit
GGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGCTGTCTCTTATACACAT53560.23313016419658672No Hit
CCCTAACCCTAACCCTAACCCTAACCCTAACCCCTGTCTCTTATACACAT44660.19439120860753478No Hit
GGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGCTGTCTCTTAT42910.18677399823890095No Hit
CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCCTGTCTCTTAT39430.17162663133441775No Hit
CGTCTAGACTGTGTGCTGTCCTTTCATGCCTTGACGGCTATGTTGATGAA36960.16087548298554602No Hit
GTTTATGACTGTATGGTGTATGTCAGATAACACAGATATGTCCTTATAAC33410.14542342766631744No Hit
GGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGATAGG31190.13576045222725056No Hit
GGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGCTGTC27560.11996018157688441No Hit
GCATATAAGCTAGTACATTAAATCAATGGTTCAGGTCATAAAATAATCAT25570.11129832521483797No Hit
GTATATGAAACTACAAATGAATCTATCTAGAATTGCAGCTCTCTCTGTGT24050.10468223392322462No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)