FastQCFastQC Report
Mon 1 Mar 2021
HTJTLBGXH_n01_dpr289.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHTJTLBGXH_n01_dpr289.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12416945
Sequences flagged as poor quality0
Sequence length76
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACC229380.18473142951023783No Hit
GGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGG176060.14179011020826782No Hit
CTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCACACTGACAGGGA174690.14068677923595538No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)