FastQCFastQC Report
Mon 1 Mar 2021
HTJTLBGXH_n01_dpr282.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHTJTLBGXH_n01_dpr282.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8460515
Sequences flagged as poor quality0
Sequence length76
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCACACTGACAGGGA3461834.091748551949852No Hit
CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACC246700.2915898145680257No Hit
GGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGG158790.18768361027667937No Hit
GTCTTAGGGCTCCAGGAGCCTCCCGTGAGAGGGCAAGCCTGTGAGAGGAC100450.11872799705455284No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)