FastQCFastQC Report
Mon 1 Mar 2021
HTJTLBGXH_n01_dpr203.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHTJTLBGXH_n01_dpr203.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1330639
Sequences flagged as poor quality0
Sequence length76
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTCATCAATGACTTTTTTGTAGTCTGGCTGGTCGAAGATTGCCGAACCG99910.7508422645060006No Hit
GTACAGTATAGATGATTGGTGGTGAGTGTGTGCCCGCACACATGTACGTG92970.6986868714955746No Hit
CTATTACGTTCTCCGGTCGCCACCTTCAGTGCCTGATGGGCAACATTTTC60790.4568481759515541No Hit
CTTATACACATCTCCGAGCCCACGAGACTTCCGATTGACAGGGACAGCCG51890.389963017768155No Hit
GCACAGGACGCGAACATGTCTTCTCATCCGTATGTCACCCAGCAAAATAC48290.3629083470422857No Hit
GGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGG33130.248978122541125No Hit
GGTGTATGCTGTCTGTTTGGTGGTCCAGTGTTTGAGAGATCTTGGGGGTC30910.23229440892683892No Hit
CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACC30650.23034046048552612No Hit
CTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCCGATTGACAGGGA15660.11768781765753146No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)