FastQCFastQC Report
Mon 1 Mar 2021
HTJTLBGXH_n01_dpr202.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHTJTLBGXH_n01_dpr202.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5634188
Sequences flagged as poor quality0
Sequence length76
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCTATACCAGTACCATGCAGTTTTTATCACAATTGCTCTGTAGTAAAGC110630.1963548252205997No Hit
GCATAATCGTCATTATCGGCAGGGTCAAATTCCAGCGGCATCCAGGATGC107440.19069296232216604No Hit
GCTCTGGTACACCCACAGGTTTGTTCATCGGCCCCCTCCCTTGGGAGCTG95880.1701753651102874No Hit
GGGTAGGGATCACCATTCTCGCTCTGCGGACAGTGCTCACAGAGCCCAAG59260.10517930889065114No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)