FastQCFastQC Report
Mon 1 Mar 2021
HTJTLBGXH_n01_dpr197.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHTJTLBGXH_n01_dpr197.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12469566
Sequences flagged as poor quality0
Sequence length76
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACC3355122.6906469719956574No Hit
GGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGG2970792.3824325561932147No Hit
CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCAAACC1188700.9532809722487535No Hit
GGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGATAGG603800.4842189375315869No Hit
CCCTAACCCTAACCCTAACCCTAACCCTAACCCCTGTCTCTTATACACAT584620.4688374880088048No Hit
GGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGCTGTCTCTTATACACAT571920.45865269087953825No Hit
GGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGCTGTCTCTTAT493340.3956352610828637No Hit
CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCCTGTCTCTTAT458060.36734237582927903No Hit
CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCCTGTC387590.31082878104979755No Hit
GGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGCTGTC324140.2599448930299579No Hit
GGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGATAAG286290.22959098977462405No Hit
CCCTAACCCTAACCCTAACCCTAACCCCTGTCTCTTATACACATCTCCGA242640.1945857618460819No Hit
GGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAAG227150.18216351715849613No Hit
GGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGG224670.18017467488443462No Hit
GGGTTAGGGTTAGGGTTAGGGTTAGGGCTGTCTCTTATACACATCTCCGA210350.16869071465678917No Hit
CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCAAAAC200800.16103206799659267No Hit
ACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAAC198710.15935598720917793No Hit
GGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTAAGG195930.1571265591761574No Hit
GGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGGTAGGGTTAGG138800.1113110111450551No Hit
GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAGTTTTCTCGCCA137090.10993967231898848No Hit
CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCAAACCCAAACC134840.10813527912679559No Hit
GATATACACTGTTCTACAAATCCCGTTTCCAACGAATGTGTTTTTCAGTG133030.10668374504774264No Hit
CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAAAC127620.10234518186118106No Hit
GGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGGTAGG126190.10119838974347622No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)