FastQCFastQC Report
Mon 1 Mar 2021
HTJTLBGXH_n01_dpr193.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHTJTLBGXH_n01_dpr193.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10712869
Sequences flagged as poor quality0
Sequence length76
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACC1357481.2671488842064622No Hit
GGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGG1075031.0034940220028827No Hit
CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCAAACC477540.44576294174791087No Hit
GGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGATAGG207930.1940936643582592No Hit
CCCTAACCCTAACCCTAACCCTAACCCTAACCCCTGTCTCTTATACACAT128110.11958514567852925No Hit
CTGTCTCTTATACACATCTCCGAGCCCACGAGACACCGTGTAGACAGGGA123320.1151138877923365No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)