FastQCFastQC Report
Mon 1 Mar 2021
HTJTLBGXH_n01_dpr192.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHTJTLBGXH_n01_dpr192.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9921410
Sequences flagged as poor quality0
Sequence length76
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACC582210.5868218327838483No Hit
GGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGG450990.45456240594834807No Hit
CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCAAACC158920.16017884554715509No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)