FastQCFastQC Report
Mon 1 Mar 2021
HTJTLBGXH_n01_dpr190.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHTJTLBGXH_n01_dpr190.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2297429
Sequences flagged as poor quality0
Sequence length76
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACC326681.421937304700167No Hit
GGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGG247081.0754630502183093No Hit
CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCAAACC115990.5048687032330488No Hit
CCCTAACCCTAACCCTAACCCTAACCCTAACCCCTGTCTCTTATACACAT55640.24218376280616288No Hit
GTTTATGACTGTATGGTGTATGTCAGATAACACAGATATGTCCTTATAAC54280.23626410217682461No Hit
GGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGCTGTCTCTTATACACAT48310.21027853309068528No Hit
CGTCTAGACTGTGTGCTGTCCTTTCATGCCTTGACGGCTATGTTGATGAA46500.2024001612236983No Hit
CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCCTGTCTCTTAT45850.19957091165820573No Hit
GGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGATAGG45750.19913564249428384No Hit
GGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGCTGTCTCTTAT43450.18912445172407938No Hit
GTCTAGACGCACCTACGGTGAAGAATCATTAGTCCGCAAAACCCAATCAC31260.1360651406419959No Hit
CCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCTAACCCCTGTC28520.12413876555053496No Hit
GGGTATAGTAATGTTCTTTTATAAGAAAATGTAGCCCATTTCTTCCCATT25530.11112421754926921No Hit
CAACTATACTTTGCCTCGGAGCCCTAACCACATTATTTACAGCTATTTGT24830.10807733340181568No Hit
GAAAGCACTCACAGCCATGTGGGTTTGGGTGAAGAGACAGACACTTGGTT24270.10563982608385286No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)