Sample adapter_content Sequences flagged as poor quality sequence_duplication_levels avg_sequence_length Encoding kmer_content per_base_sequence_quality sequence_length_distribution Sequence length File type basic_statistics per_sequence_gc_content Total Sequences per_base_n_content per_base_sequence_content overrepresented_sequences %GC total_deduplicated_percentage Filename per_tile_sequence_quality per_sequence_quality_scores HTHTVAFXY_n01_AtChl1.5 warn 0.0 pass 21.0 Sanger / Illumina 1.9 pass pass pass 21.0 Conventional base calls pass pass 2458.0 pass fail warn 49.0 99.755899105 HTHTVAFXY_n01_AtChl1.5.fastq.gz fail pass HTHTVAFXY_n01_AtNLP7 warn 0.0 pass 21.0 Sanger / Illumina 1.9 pass pass pass 21.0 Conventional base calls pass pass 3019.0 pass fail pass 50.0 99.9337528983 HTHTVAFXY_n01_AtNLP7.fastq.gz fail pass HTHTVAFXY_n01_At_Chl1.5 warn 0.0 pass 21.0 Sanger / Illumina 1.9 fail pass pass 21.0 Conventional base calls pass pass 19070044.0 pass fail pass 50.0 81.7451135293 HTHTVAFXY_n01_At_Chl1.5.fastq.gz pass pass HTHTVAFXY_n01_At_NLP7 warn 0.0 warn 21.0 Sanger / Illumina 1.9 fail pass pass 21.0 Conventional base calls pass pass 23963394.0 pass fail pass 50.0 63.381132223 HTHTVAFXY_n01_At_NLP7.fastq.gz pass pass HTHTVAFXY_n01_Col-1 warn 0.0 pass 21.0 Sanger / Illumina 1.9 pass pass pass 21.0 Conventional base calls pass fail 323.0 pass fail warn 49.0 100.0 HTHTVAFXY_n01_Col-1.fastq.gz fail pass HTHTVAFXY_n01_Col-2 warn 0.0 pass 21.0 Sanger / Illumina 1.9 pass pass pass 21.0 Conventional base calls pass pass 523.0 pass fail warn 46.0 99.0439770554 HTHTVAFXY_n01_Col-2.fastq.gz fail pass HTHTVAFXY_n01_Columbia-1 warn 0.0 pass 21.0 Sanger / Illumina 1.9 fail pass pass 21.0 Conventional base calls pass pass 28077370.0 pass fail warn 49.0 74.8883798874 HTHTVAFXY_n01_Columbia-1.fastq.gz pass pass HTHTVAFXY_n01_Columbia-2 warn 0.0 pass 21.0 Sanger / Illumina 1.9 fail pass pass 21.0 Conventional base calls pass pass 38401866.0 pass fail warn 45.0 81.3658762902 HTHTVAFXY_n01_Columbia-2.fastq.gz pass pass HTHTVAFXY_n01_undetermined warn 0.0 fail 21.0 Sanger / Illumina 1.9 fail pass pass 21.0 Conventional base calls pass pass 11630046.0 pass warn warn 46.0 31.3357446362 HTHTVAFXY_n01_undetermined.fastq.gz pass pass HTHTVAFXY_n02_AtChl1.5 pass 0.0 pass 129.0 Sanger / Illumina 1.9 warn fail pass 129.0 Conventional base calls pass warn 2458.0 pass fail pass 41.0 99.83726607 HTHTVAFXY_n02_AtChl1.5.fastq.gz fail warn HTHTVAFXY_n02_AtNLP7 pass 0.0 pass 129.0 Sanger / Illumina 1.9 pass pass pass 129.0 Conventional base calls pass pass 3019.0 pass fail warn 41.0 98.2444518052 HTHTVAFXY_n02_AtNLP7.fastq.gz fail warn HTHTVAFXY_n02_At_Chl1.5 pass 0.0 fail 129.0 Sanger / Illumina 1.9 fail pass pass 129.0 Conventional base calls pass warn 19070044.0 pass fail warn 39.0 41.8520930734 HTHTVAFXY_n02_At_Chl1.5.fastq.gz pass pass HTHTVAFXY_n02_At_NLP7 pass 0.0 fail 129.0 Sanger / Illumina 1.9 fail pass pass 129.0 Conventional base calls pass fail 23963394.0 pass fail warn 37.0 41.5026225141 HTHTVAFXY_n02_At_NLP7.fastq.gz pass pass HTHTVAFXY_n02_Col-1 pass 0.0 pass 129.0 Sanger / Illumina 1.9 pass fail pass 129.0 Conventional base calls pass fail 323.0 pass fail warn 41.0 100.0 HTHTVAFXY_n02_Col-1.fastq.gz fail warn HTHTVAFXY_n02_Col-2 pass 0.0 pass 129.0 Sanger / Illumina 1.9 warn fail pass 129.0 Conventional base calls pass fail 523.0 pass fail warn 43.0 99.8087954111 HTHTVAFXY_n02_Col-2.fastq.gz fail warn HTHTVAFXY_n02_Columbia-1 pass 0.0 fail 129.0 Sanger / Illumina 1.9 fail warn pass 129.0 Conventional base calls pass fail 28077370.0 pass fail warn 39.0 35.2618639247 HTHTVAFXY_n02_Columbia-1.fastq.gz pass pass HTHTVAFXY_n02_Columbia-2 pass 0.0 fail 129.0 Sanger / Illumina 1.9 fail pass pass 129.0 Conventional base calls pass fail 38401866.0 pass fail warn 43.0 40.7234868274 HTHTVAFXY_n02_Columbia-2.fastq.gz pass pass HTHTVAFXY_n02_undetermined pass 0.0 fail 129.0 Sanger / Illumina 1.9 fail pass pass 129.0 Conventional base calls pass fail 11630046.0 pass pass warn 45.0 40.8693097227 HTHTVAFXY_n02_undetermined.fastq.gz pass pass