Sample	Filename	File type	Encoding	Total Sequences	Sequences flagged as poor quality	Sequence length	%GC	total_deduplicated_percentage	avg_sequence_length	basic_statistics	per_base_sequence_quality	per_tile_sequence_quality	per_sequence_quality_scores	per_base_sequence_content	per_sequence_gc_content	per_base_n_content	sequence_length_distribution	sequence_duplication_levels	overrepresented_sequences	adapter_content
HTHCVAFX2_n01_10517-antiPHD	HTHCVAFX2_n01_10517-antiPHD.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	793106.0	0.0	151.0	39.0	50.818416200430725	151.0	pass	pass	pass	pass	warn	fail	pass	pass	warn	warn	fail
HTHCVAFX2_n01_10517-input	HTHCVAFX2_n01_10517-input.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	5019517.0	0.0	151.0	50.0	74.32773234189762	151.0	pass	pass	pass	pass	fail	warn	pass	pass	pass	pass	fail
HTHCVAFX2_n01_7797-antiPHD	HTHCVAFX2_n01_7797-antiPHD.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	618451.0	0.0	151.0	43.0	29.86120241678232	151.0	pass	pass	pass	pass	warn	warn	pass	pass	fail	warn	fail
HTHCVAFX2_n01_7797-input	HTHCVAFX2_n01_7797-input-.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	12802065.0	0.0	151.0	51.0	66.92616019776887	151.0	pass	pass	pass	pass	fail	warn	pass	pass	warn	pass	fail
HTHCVAFX2_n01_7797-noprotein-antiPHD	HTHCVAFX2_n01_7797-noprotein-antiPHD.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	289046.0	0.0	151.0	44.0	50.77220039332627	151.0	pass	pass	pass	pass	warn	warn	pass	pass	warn	warn	fail
HTHCVAFX2_n01_7797-noprotein-input	HTHCVAFX2_n01_7797-noprotein-input.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	16045396.0	0.0	151.0	51.0	65.06434883317203	151.0	pass	pass	pass	pass	fail	pass	pass	pass	warn	pass	fail
HTHCVAFX2_n01_9120-antiPHD	HTHCVAFX2_n01_9120-antiPHD.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	1130941.0	0.0	151.0	43.0	41.44616316394292	151.0	pass	pass	pass	pass	warn	warn	pass	pass	fail	fail	fail
HTHCVAFX2_n01_9120-input	HTHCVAFX2_n01_9120-input.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	15088810.0	0.0	151.0	52.0	64.6087117847286	151.0	pass	pass	pass	pass	fail	warn	pass	pass	warn	pass	fail
HTHCVAFX2_n01_9251-antiPHD	HTHCVAFX2_n01_9251-antiPHD.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	1512101.0	0.0	151.0	42.0	49.497119718011895	151.0	pass	pass	pass	pass	warn	fail	pass	pass	fail	warn	fail
HTHCVAFX2_n01_9251-input	HTHCVAFX2_n01_9251-input.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	2670036.0	0.0	151.0	47.0	80.63362532253143	151.0	pass	pass	pass	pass	fail	warn	pass	pass	pass	pass	fail
HTHCVAFX2_n01_AH10517-antiHop1-NH	HTHCVAFX2_n01_AH10517-antiHop1-NH.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	6200660.0	0.0	151.0	38.0	69.50552758813318	151.0	pass	pass	pass	pass	pass	warn	pass	pass	warn	warn	pass
HTHCVAFX2_n01_AH10517-input	HTHCVAFX2_n01_AH10517-input.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	9176771.0	0.0	151.0	39.0	69.27482868504367	151.0	pass	pass	pass	pass	fail	pass	pass	pass	warn	pass	warn
HTHCVAFX2_n01_AH5187-antiHop1-NH	HTHCVAFX2_n01_AH5187-antiHop1-NH.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	3896739.0	0.0	151.0	39.0	65.61534749129004	151.0	pass	pass	pass	pass	pass	warn	pass	pass	warn	fail	pass
HTHCVAFX2_n01_AH5187-input	HTHCVAFX2_n01_AH5187-input.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	2932786.0	0.0	151.0	35.0	64.45459979742807	151.0	pass	pass	pass	pass	warn	fail	pass	pass	warn	pass	pass
HTHCVAFX2_n01_AH7797-antiHop1NH	HTHCVAFX2_n01_AH7797-antiHop1NH.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	5336216.0	0.0	151.0	39.0	74.41733749725131	151.0	pass	pass	pass	pass	pass	pass	pass	pass	pass	pass	pass
HTHCVAFX2_n01_AH7797-input	HTHCVAFX2_n01_AH7797-input-.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	9247291.0	0.0	151.0	40.0	70.56464141885861	151.0	pass	pass	pass	pass	fail	pass	pass	pass	pass	pass	fail
HTHCVAFX2_n01_AH9120-antiHop1-NH	HTHCVAFX2_n01_AH9120-antiHop1-NH.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	6558357.0	0.0	151.0	39.0	65.09834526587044	151.0	pass	pass	pass	pass	pass	pass	pass	pass	warn	warn	pass
HTHCVAFX2_n01_AH9120-input	HTHCVAFX2_n01_AH9120-input.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	9906287.0	0.0	151.0	39.0	68.34262244024411	151.0	pass	pass	pass	pass	fail	pass	pass	pass	warn	pass	warn
HTHCVAFX2_n01_AH9251-antiHop1-NH	HTHCVAFX2_n01_AH9251-antiHop1-NH.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	7478312.0	0.0	151.0	39.0	72.11828629020187	151.0	pass	pass	pass	pass	pass	pass	pass	pass	pass	fail	pass
HTHCVAFX2_n01_AH9251-input	HTHCVAFX2_n01_AH9251-input.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	6623542.0	0.0	151.0	39.0	74.40763611314242	151.0	pass	pass	pass	pass	fail	pass	pass	pass	pass	pass	warn
HTHCVAFX2_n01_undetermined	HTHCVAFX2_n01_undetermined.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	8108882.0	0.0	151.0	44.0	20.553744859981993	151.0	pass	pass	pass	pass	pass	fail	pass	pass	fail	pass	warn
HTHCVAFX2_n02_10517-antiPHD	HTHCVAFX2_n02_10517-antiPHD.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	793106.0	0.0	151.0	38.0	58.64124701278982	151.0	pass	pass	pass	pass	fail	fail	pass	pass	warn	warn	fail
HTHCVAFX2_n02_10517-input	HTHCVAFX2_n02_10517-input.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	5019517.0	0.0	151.0	48.0	76.71170321741833	151.0	pass	pass	pass	pass	fail	fail	pass	pass	pass	warn	fail
HTHCVAFX2_n02_7797-antiPHD	HTHCVAFX2_n02_7797-antiPHD.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	618451.0	0.0	151.0	43.0	37.47236787460597	151.0	pass	pass	pass	pass	fail	warn	pass	pass	fail	warn	fail
HTHCVAFX2_n02_7797-input	HTHCVAFX2_n02_7797-input-.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	12802065.0	0.0	151.0	48.0	69.8109961836202	151.0	pass	pass	pass	pass	fail	fail	pass	pass	warn	warn	fail
HTHCVAFX2_n02_7797-noprotein-antiPHD	HTHCVAFX2_n02_7797-noprotein-antiPHD.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	289046.0	0.0	151.0	43.0	55.76157206690501	151.0	pass	pass	pass	pass	fail	fail	pass	pass	warn	warn	fail
HTHCVAFX2_n02_7797-noprotein-input	HTHCVAFX2_n02_7797-noprotein-input.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	16045396.0	0.0	151.0	48.0	68.14403531656838	151.0	pass	pass	pass	pass	fail	fail	pass	pass	warn	warn	fail
HTHCVAFX2_n02_9120-antiPHD	HTHCVAFX2_n02_9120-antiPHD.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	1130941.0	0.0	151.0	44.0	49.61598611796158	151.0	pass	pass	pass	pass	fail	fail	pass	pass	fail	fail	fail
HTHCVAFX2_n02_9120-input	HTHCVAFX2_n02_9120-input.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	15088810.0	0.0	151.0	49.0	67.29846250298492	151.0	pass	pass	pass	pass	fail	fail	pass	pass	warn	warn	fail
HTHCVAFX2_n02_9251-antiPHD	HTHCVAFX2_n02_9251-antiPHD.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	1512101.0	0.0	151.0	42.0	56.489456886951736	151.0	pass	pass	pass	pass	fail	fail	pass	pass	warn	fail	fail
HTHCVAFX2_n02_9251-input	HTHCVAFX2_n02_9251-input.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	2670036.0	0.0	151.0	47.0	82.55552132771358	151.0	pass	pass	pass	pass	fail	fail	pass	pass	pass	warn	fail
HTHCVAFX2_n02_AH10517-antiHop1-NH	HTHCVAFX2_n02_AH10517-antiHop1-NH.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	6200660.0	0.0	151.0	39.0	70.8452578579365	151.0	pass	pass	pass	pass	fail	fail	pass	pass	pass	fail	pass
HTHCVAFX2_n02_AH10517-input	HTHCVAFX2_n02_AH10517-input.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	9176771.0	0.0	151.0	39.0	70.11575632824628	151.0	pass	pass	pass	pass	fail	warn	pass	pass	pass	warn	warn
HTHCVAFX2_n02_AH5187-antiHop1-NH	HTHCVAFX2_n02_AH5187-antiHop1-NH.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	3896739.0	0.0	151.0	40.0	67.23571305984697	151.0	pass	pass	pass	pass	fail	fail	pass	pass	warn	fail	pass
HTHCVAFX2_n02_AH5187-input	HTHCVAFX2_n02_AH5187-input.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	2932786.0	0.0	151.0	35.0	65.36272317984373	151.0	pass	pass	pass	pass	warn	fail	pass	pass	warn	warn	pass
HTHCVAFX2_n02_AH7797-antiHop1NH	HTHCVAFX2_n02_AH7797-antiHop1NH.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	5336216.0	0.0	151.0	39.0	75.72152423395002	151.0	pass	pass	pass	pass	fail	warn	pass	pass	pass	warn	pass
HTHCVAFX2_n02_AH7797-input	HTHCVAFX2_n02_AH7797-input-.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	9247291.0	0.0	151.0	40.0	71.14744411336777	151.0	pass	pass	pass	pass	fail	pass	pass	pass	pass	warn	fail
HTHCVAFX2_n02_AH9120-antiHop1-NH	HTHCVAFX2_n02_AH9120-antiHop1-NH.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	6558357.0	0.0	151.0	39.0	67.03684109672083	151.0	pass	pass	pass	pass	fail	warn	pass	pass	warn	warn	pass
HTHCVAFX2_n02_AH9120-input	HTHCVAFX2_n02_AH9120-input.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	9906287.0	0.0	151.0	39.0	69.19399471118682	151.0	pass	pass	pass	pass	fail	pass	pass	pass	warn	warn	warn
HTHCVAFX2_n02_AH9251-antiHop1-NH	HTHCVAFX2_n02_AH9251-antiHop1-NH.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	7478312.0	0.0	151.0	41.0	72.49775351389185	151.0	pass	pass	pass	pass	fail	fail	pass	pass	pass	fail	pass
HTHCVAFX2_n02_AH9251-input	HTHCVAFX2_n02_AH9251-input.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	6623542.0	0.0	151.0	39.0	75.03238102499661	151.0	pass	pass	pass	pass	fail	warn	pass	pass	pass	warn	warn
HTHCVAFX2_n02_undetermined	HTHCVAFX2_n02_undetermined.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	8108882.0	0.0	151.0	45.0	21.911988965143237	151.0	pass	pass	pass	pass	pass	fail	pass	pass	fail	fail	warn