Sample Filename File type Encoding Total Sequences Sequences flagged as poor quality Sequence length %GC total_deduplicated_percentage avg_sequence_length basic_statistics per_base_sequence_quality per_tile_sequence_quality per_sequence_quality_scores per_base_sequence_content per_sequence_gc_content per_base_n_content sequence_length_distribution sequence_duplication_levels overrepresented_sequences adapter_content HTHCTDRXX_l02_n01_ZmTARGET.20190625-1141-minusN-01 HTHCTDRXX_l02_n01_ZmTARGET.20190625-1141-minusN-01.fastq.gz Conventional base calls Sanger / Illumina 1.9 7523051.0 0.0 76.0 45.0 42.76446499496242 76.0 pass pass pass pass fail fail pass pass fail warn warn HTHCTDRXX_l02_n01_ZmTARGET.20190625-1141-minusN-02 HTHCTDRXX_l02_n01_ZmTARGET.20190625-1141-minusN-02.fastq.gz Conventional base calls Sanger / Illumina 1.9 7291777.0 0.0 76.0 44.0 38.68587419611046 76.0 pass pass pass pass fail fail pass pass fail warn warn HTHCTDRXX_l02_n01_ZmTARGET.20190625-1141-minusN-03 HTHCTDRXX_l02_n01_ZmTARGET.20190625-1141-minusN-03.fastq.gz Conventional base calls Sanger / Illumina 1.9 8366809.0 0.0 76.0 44.0 41.56200220073087 76.0 pass pass pass pass fail fail pass pass fail warn warn HTHCTDRXX_l02_n01_ZmTARGET.20190625-1141-plusN-01 HTHCTDRXX_l02_n01_ZmTARGET.20190625-1141-plusN-01.fastq.gz Conventional base calls Sanger / Illumina 1.9 10991480.0 0.0 76.0 42.0 21.248135293890037 76.0 pass pass pass pass fail warn pass pass fail warn fail HTHCTDRXX_l02_n01_ZmTARGET.20190625-1141-plusN-02 HTHCTDRXX_l02_n01_ZmTARGET.20190625-1141-plusN-02.fastq.gz Conventional base calls Sanger / Illumina 1.9 10228199.0 0.0 76.0 44.0 20.002072314822897 76.0 pass pass pass pass fail fail pass pass fail warn warn HTHCTDRXX_l02_n01_ZmTARGET.20190625-1141-plusN-03 HTHCTDRXX_l02_n01_ZmTARGET.20190625-1141-plusN-03.fastq.gz Conventional base calls Sanger / Illumina 1.9 15184289.0 0.0 76.0 41.0 37.72211291502237 76.0 pass pass pass pass fail warn pass pass fail pass fail HTHCTDRXX_l02_n01_ZmTARGET.20190625-3038-minusN-01 HTHCTDRXX_l02_n01_ZmTARGET.20190625-3038-minusN-01.fastq.gz Conventional base calls Sanger / Illumina 1.9 6415136.0 0.0 76.0 43.0 53.594304591021654 76.0 pass pass pass pass fail fail pass pass warn warn warn HTHCTDRXX_l02_n01_ZmTARGET.20190625-3038-minusN-02 HTHCTDRXX_l02_n01_ZmTARGET.20190625-3038-minusN-02.fastq.gz Conventional base calls Sanger / Illumina 1.9 7018468.0 0.0 76.0 39.0 34.96526701386363 76.0 pass pass pass pass fail warn pass pass fail warn fail HTHCTDRXX_l02_n01_ZmTARGET.20190625-3038-minusN-03 HTHCTDRXX_l02_n01_ZmTARGET.20190625-3038-minusN-03.fastq.gz Conventional base calls Sanger / Illumina 1.9 9467345.0 0.0 76.0 44.0 37.68516757498016 76.0 pass pass pass pass fail fail pass pass fail warn warn HTHCTDRXX_l02_n01_ZmTARGET.20190625-3038-plusN-01 HTHCTDRXX_l02_n01_ZmTARGET.20190625-3038-plusN-01.fastq.gz Conventional base calls Sanger / Illumina 1.9 9618327.0 0.0 76.0 44.0 30.63938691554895 76.0 pass pass pass pass fail fail pass pass fail warn pass HTHCTDRXX_l02_n01_ZmTARGET.20190625-3038-plusN-02 HTHCTDRXX_l02_n01_ZmTARGET.20190625-3038-plusN-02.fastq.gz Conventional base calls Sanger / Illumina 1.9 10681575.0 0.0 76.0 44.0 21.93876262000426 76.0 pass pass pass pass fail fail pass pass fail warn warn HTHCTDRXX_l02_n01_ZmTARGET.20190625-3038-plusN-03 HTHCTDRXX_l02_n01_ZmTARGET.20190625-3038-plusN-03.fastq.gz Conventional base calls Sanger / Illumina 1.9 9897519.0 0.0 76.0 46.0 21.134290519021175 76.0 pass pass pass pass fail fail pass pass fail warn pass HTHCTDRXX_l02_n01_ZmTARGET.20190625-3125-minusN-01 HTHCTDRXX_l02_n01_ZmTARGET.20190625-3125-minusN-01.fastq.gz Conventional base calls Sanger / Illumina 1.9 6953191.0 0.0 76.0 42.0 35.26106745051862 76.0 pass pass pass pass fail fail pass pass fail warn warn HTHCTDRXX_l02_n01_ZmTARGET.20190625-3125-minusN-02 HTHCTDRXX_l02_n01_ZmTARGET.20190625-3125-minusN-02.fastq.gz Conventional base calls Sanger / Illumina 1.9 7497391.0 0.0 76.0 42.0 39.31892548424423 76.0 pass pass pass pass fail fail pass pass fail warn warn HTHCTDRXX_l02_n01_ZmTARGET.20190625-3125-minusN-03 HTHCTDRXX_l02_n01_ZmTARGET.20190625-3125-minusN-03.fastq.gz Conventional base calls Sanger / Illumina 1.9 7482306.0 0.0 76.0 44.0 42.70800995335121 76.0 pass pass pass pass fail fail pass pass fail warn fail HTHCTDRXX_l02_n01_ZmTARGET.20190625-3125-plusN-01 HTHCTDRXX_l02_n01_ZmTARGET.20190625-3125-plusN-01.fastq.gz Conventional base calls Sanger / Illumina 1.9 11785716.0 0.0 76.0 41.0 25.790052109576607 76.0 pass pass pass pass fail warn pass pass fail warn fail HTHCTDRXX_l02_n01_ZmTARGET.20190625-3125-plusN-02 HTHCTDRXX_l02_n01_ZmTARGET.20190625-3125-plusN-02.fastq.gz Conventional base calls Sanger / Illumina 1.9 11258112.0 0.0 76.0 46.0 22.717606784448925 76.0 pass pass pass pass fail fail pass pass fail warn pass HTHCTDRXX_l02_n01_ZmTARGET.20190625-3125-plusN-03 HTHCTDRXX_l02_n01_ZmTARGET.20190625-3125-plusN-03.fastq.gz Conventional base calls Sanger / Illumina 1.9 10427179.0 0.0 76.0 41.0 24.052520830647904 76.0 pass pass pass pass fail warn pass pass fail warn fail HTHCTDRXX_l02_n01_ZmTARGET.20190625-3460-minusN-01 HTHCTDRXX_l02_n01_ZmTARGET.20190625-3460-minusN-01.fastq.gz Conventional base calls Sanger / Illumina 1.9 6882248.0 0.0 76.0 42.0 48.95358855792974 76.0 pass pass pass pass fail fail pass pass fail warn fail HTHCTDRXX_l02_n01_ZmTARGET.20190625-3460-minusN-02 HTHCTDRXX_l02_n01_ZmTARGET.20190625-3460-minusN-02.fastq.gz Conventional base calls Sanger / Illumina 1.9 8829274.0 0.0 76.0 42.0 28.211384269534378 76.0 pass pass pass pass fail fail pass pass fail warn fail HTHCTDRXX_l02_n01_ZmTARGET.20190625-3460-minusN-03 HTHCTDRXX_l02_n01_ZmTARGET.20190625-3460-minusN-03.fastq.gz Conventional base calls Sanger / Illumina 1.9 11179855.0 0.0 76.0 48.0 28.086259062049574 76.0 pass fail pass pass fail warn pass pass fail pass fail HTHCTDRXX_l02_n01_ZmTARGET.20190625-3460-plusN-01 HTHCTDRXX_l02_n01_ZmTARGET.20190625-3460-plusN-01.fastq.gz Conventional base calls Sanger / Illumina 1.9 10734126.0 0.0 76.0 44.0 36.957493887990985 76.0 pass pass pass pass fail fail pass pass fail warn pass HTHCTDRXX_l02_n01_ZmTARGET.20190625-3460-plusN-02 HTHCTDRXX_l02_n01_ZmTARGET.20190625-3460-plusN-02.fastq.gz Conventional base calls Sanger / Illumina 1.9 9493054.0 0.0 76.0 44.0 11.881479623650733 76.0 pass pass pass pass fail fail pass pass fail warn warn HTHCTDRXX_l02_n01_ZmTARGET.20190625-3460-plusN-03 HTHCTDRXX_l02_n01_ZmTARGET.20190625-3460-plusN-03.fastq.gz Conventional base calls Sanger / Illumina 1.9 10406526.0 0.0 76.0 41.0 36.56909373823165 76.0 pass pass pass pass fail warn pass pass fail warn fail HTHCTDRXX_l02_n01_ZmTARGET.20190625-3687-minusN-01 HTHCTDRXX_l02_n01_ZmTARGET.20190625-3687-minusN-01.fastq.gz Conventional base calls Sanger / Illumina 1.9 7993230.0 0.0 76.0 44.0 45.212380591947934 76.0 pass pass pass pass fail fail pass pass fail warn warn HTHCTDRXX_l02_n01_ZmTARGET.20190625-3687-minusN-02 HTHCTDRXX_l02_n01_ZmTARGET.20190625-3687-minusN-02.fastq.gz Conventional base calls Sanger / Illumina 1.9 5805459.0 0.0 76.0 44.0 43.85150770771206 76.0 pass pass pass pass fail fail pass pass fail warn warn HTHCTDRXX_l02_n01_ZmTARGET.20190625-3687-minusN-03 HTHCTDRXX_l02_n01_ZmTARGET.20190625-3687-minusN-03.fastq.gz Conventional base calls Sanger / Illumina 1.9 7379276.0 0.0 76.0 41.0 40.700735993637544 76.0 pass pass pass pass fail warn pass pass fail warn fail HTHCTDRXX_l02_n01_ZmTARGET.20190625-3687-plusN-01 HTHCTDRXX_l02_n01_ZmTARGET.20190625-3687-plusN-01.fastq.gz Conventional base calls Sanger / Illumina 1.9 10764163.0 0.0 76.0 45.0 24.7278733492267 76.0 pass pass pass pass fail fail pass pass fail warn pass HTHCTDRXX_l02_n01_ZmTARGET.20190625-3687-plusN-02 HTHCTDRXX_l02_n01_ZmTARGET.20190625-3687-plusN-02.fastq.gz Conventional base calls Sanger / Illumina 1.9 11308532.0 0.0 76.0 46.0 15.507060681836277 76.0 pass pass pass pass fail fail pass pass fail warn pass HTHCTDRXX_l02_n01_ZmTARGET.20190625-3687-plusN-03 HTHCTDRXX_l02_n01_ZmTARGET.20190625-3687-plusN-03.fastq.gz Conventional base calls Sanger / Illumina 1.9 11178225.0 0.0 76.0 45.0 17.0002743418113 76.0 pass pass pass pass fail fail pass pass fail warn pass HTHCTDRXX_l02_n01_ZmTARGET.20190625-4432-minusN-01 HTHCTDRXX_l02_n01_ZmTARGET.20190625-4432-minusN-01.fastq.gz Conventional base calls Sanger / Illumina 1.9 5667712.0 0.0 76.0 41.0 32.623218182785806 76.0 pass pass pass pass fail fail pass pass fail warn fail HTHCTDRXX_l02_n01_ZmTARGET.20190625-4432-minusN-02 HTHCTDRXX_l02_n01_ZmTARGET.20190625-4432-minusN-02.fastq.gz Conventional base calls Sanger / Illumina 1.9 7537672.0 0.0 76.0 43.0 51.12992861962722 76.0 pass pass pass pass fail fail pass pass warn warn warn HTHCTDRXX_l02_n01_ZmTARGET.20190625-4432-minusN-03 HTHCTDRXX_l02_n01_ZmTARGET.20190625-4432-minusN-03.fastq.gz Conventional base calls Sanger / Illumina 1.9 8552650.0 0.0 76.0 43.0 40.4448309826378 76.0 pass pass pass pass fail fail pass pass fail warn fail HTHCTDRXX_l02_n01_ZmTARGET.20190625-4432-plusN-01 HTHCTDRXX_l02_n01_ZmTARGET.20190625-4432-plusN-01.fastq.gz Conventional base calls Sanger / Illumina 1.9 9850438.0 0.0 76.0 45.0 14.482638097644083 76.0 pass pass pass pass fail fail pass pass fail warn pass HTHCTDRXX_l02_n01_ZmTARGET.20190625-4432-plusN-02 HTHCTDRXX_l02_n01_ZmTARGET.20190625-4432-plusN-02.fastq.gz Conventional base calls Sanger / Illumina 1.9 11639216.0 0.0 76.0 46.0 21.875612591403808 76.0 pass pass pass pass fail fail pass pass fail warn pass HTHCTDRXX_l02_n01_ZmTARGET.20190625-4432-plusN-03 HTHCTDRXX_l02_n01_ZmTARGET.20190625-4432-plusN-03.fastq.gz Conventional base calls Sanger / Illumina 1.9 14328635.0 0.0 76.0 47.0 26.58546618207674 76.0 pass pass pass pass fail fail pass pass fail warn pass HTHCTDRXX_l02_n01_ZmTARGET.20190625-p1107NLSGFP-minusN-01 HTHCTDRXX_l02_n01_ZmTARGET.20190625-p1107NLSGFP-minusN-01.fastq.gz Conventional base calls Sanger / Illumina 1.9 6422170.0 0.0 76.0 42.0 50.75234942269429 76.0 pass pass pass pass fail fail pass pass warn warn warn HTHCTDRXX_l02_n01_ZmTARGET.20190625-p1107NLSGFP-minusN-02 HTHCTDRXX_l02_n01_ZmTARGET.20190625-p1107NLSGFP-minusN-02.fastq.gz Conventional base calls Sanger / Illumina 1.9 6446850.0 0.0 76.0 42.0 53.55118891844416 76.0 pass pass pass pass fail fail pass pass warn warn warn HTHCTDRXX_l02_n01_ZmTARGET.20190625-p1107NLSGFP-minusN-03 HTHCTDRXX_l02_n01_ZmTARGET.20190625-p1107NLSGFP-minusN-03.fastq.gz Conventional base calls Sanger / Illumina 1.9 9718.0 0.0 76.0 43.0 88.54702613706525 76.0 pass pass fail pass fail fail pass pass pass warn fail HTHCTDRXX_l02_n01_ZmTARGET.20190625-p1107NLSGFP-minusN-04 HTHCTDRXX_l02_n01_ZmTARGET.20190625-p1107NLSGFP-minusN-04.fastq.gz Conventional base calls Sanger / Illumina 1.9 7976448.0 0.0 76.0 43.0 49.51890772202987 76.0 pass pass pass pass fail fail pass pass fail warn fail HTHCTDRXX_l02_n01_ZmTARGET.20190625-p1107NLSGFP-plusN-01 HTHCTDRXX_l02_n01_ZmTARGET.20190625-p1107NLSGFP-plusN-01.fastq.gz Conventional base calls Sanger / Illumina 1.9 10103537.0 0.0 76.0 45.0 34.448223023010584 76.0 pass pass pass pass fail fail pass pass fail warn pass HTHCTDRXX_l02_n01_ZmTARGET.20190625-p1107NLSGFP-plusN-02 HTHCTDRXX_l02_n01_ZmTARGET.20190625-p1107NLSGFP-plusN-02.fastq.gz Conventional base calls Sanger / Illumina 1.9 7547667.0 0.0 76.0 45.0 35.994431356365325 76.0 pass pass pass pass fail fail pass pass fail warn warn HTHCTDRXX_l02_n01_ZmTARGET.20190625-p1107NLSGFP-plusN-03 HTHCTDRXX_l02_n01_ZmTARGET.20190625-p1107NLSGFP-plusN-03.fastq.gz Conventional base calls Sanger / Illumina 1.9 7512028.0 0.0 76.0 45.0 32.77062446675927 76.0 pass pass pass pass fail fail pass pass fail warn pass HTHCTDRXX_l02_n01_ZmTARGET.20190625-p1107NLSGFP-plusN-04 HTHCTDRXX_l02_n01_ZmTARGET.20190625-p1107NLSGFP-plusN-04.fastq.gz Conventional base calls Sanger / Illumina 1.9 11592046.0 0.0 76.0 45.0 17.532955459427285 76.0 pass pass pass pass fail fail pass pass fail warn pass HTHCTDRXX_l02_n01_undetermined HTHCTDRXX_l02_n01_undetermined.fastq.gz Conventional base calls Sanger / Illumina 1.9 148315956.0 0.0 76.0 44.0 4.408453447078663 76.0 pass pass pass pass pass warn pass pass fail pass pass