FastQCFastQC Report
Fri 2 Oct 2020
HTGTLBGXG_n02_S2_R2_G12_FD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHTGTLBGXG_n02_S2_R2_G12_FD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATATACATCCGTTCCTGGTCATCCGACTCCAACTGTACCGATATATATCA15.88235294117647No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGG15.88235294117647No Hit
AGTTTAAAGAAGACGTTTAACCCTTCATGGATAAGGAATAATTAATGAAG15.88235294117647No Hit
CCACCGACCAGTTCTGGAGAGGAGGAGCAGATGTCTGAAAACAAGTAGAA15.88235294117647No Hit
CAATTCAATTAATCCGAACAGTACCCCAACTGCAATTTTTACAACCTAAG15.88235294117647No Hit
TAGTTGAAGACTCCCGCACGGAGAGAGTGGTAGTGAGTATTGACCGATTT15.88235294117647No Hit
CTTCTAATAGATGGCACAGCATCACTGAGTCCTGGGATGATGATGGGCAT15.88235294117647No Hit
CAATTGCGATGTATTTGATGCTGCCTATGTTACTCAAAATTCAGCTTTGA15.88235294117647No Hit
CAAAGGCTCTGTCCAGCCAAAGACTGGCTGCATCCATTTGAGTGCAGCAT15.88235294117647No Hit
CAGTGATTATGAGGGACGACTAATCCAGAATAGCATAACAATAGAGAGGA15.88235294117647No Hit
GCAATGACCAAGGCCGAATTTATGTACACTCCCTTCATTATGTATTCAGT15.88235294117647No Hit
GTGCAACTCTTCAATATAACCACTGCCTGTTCCGCCGGCTACTGGTAGAA15.88235294117647No Hit
TACTTACCATGTTGAACATGCCCATCATCATCCCACGACTCAGTGATGCT15.88235294117647No Hit
GTATCGTCTAATGGAGCAAATGGAGTAAAAGGGTTTTGATTCAAATACGG15.88235294117647No Hit
ATCCCATACCCACAATCAGGCAGGCAGGATTTATGTGCAAATGATCACCT15.88235294117647No Hit
GTGTACAGCACCTTACTGGAAAAATATGTATTAAACAGTCTATATGCTTC15.88235294117647No Hit
TCCCACAGCATAGAATACAGAATCAATCTCTATATGACTGACAAAGGGAT15.88235294117647No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)