FastQCFastQC Report
Fri 2 Oct 2020
HTGTLBGXG_n02_S2_R2_F09_FD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHTGTLBGXG_n02_S2_R2_F09_FD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences143
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGCTGCACTCTGCTGTGATATACTGCTGCTCTATGCTATCCTACTGTAC21.3986013986013985No Hit
GTATATATGTCTGCATGTATGTATGTGTGTGTGTGTGTGTGTATGTATGT21.3986013986013985No Hit
GGATGAGGGAGACGAGTGTGGGAAGAAGCGGTGGAGCTCCGCCAGGACAA21.3986013986013985No Hit
GCAGGGCAGATGTTAGTGGAGGGGGGCCGGAGGTGATACCGTTACCTTCA21.3986013986013985No Hit
CACACACACACACACACACACACACACACACACACACACACACACACACA21.3986013986013985No Hit
GATCTGGGATACTGAATGTACCACTGTAGACTATCTGCAGAAGAGTAATT21.3986013986013985No Hit
ACTGTAGACTATCTGCAGAAGAGTAATTACAGGACAAGGTAACATTCAGT21.3986013986013985No Hit
CATACATACACACACACACACACACATACATACATGCAGACATATATACA10.6993006993006993No Hit
CAGGAAGTCAACGAACGGGAGCTGCAGTCACAGGACTGTCTCTTATACAC10.6993006993006993No Hit
CGACAGGTGGGAGGATTGCAGGGTTGGGTGGCTGGGTGGAGCGGGCTGGT10.6993006993006993No Hit
CATGCATACATACACACACACACACACACACACACACCCACACCCACACC10.6993006993006993No Hit
CACACACACACAAACATACATGCATACATAAATACATCCAGACAAACACA10.6993006993006993No Hit
CCTGTGAGGTGTTTGTGTGTTTAATGTGTGAGAGTGTGAGTGTGTGTGTG10.6993006993006993No Hit
GAGTGTGGGAAGAAGCGGTGGAGCTCCGCCAGGACAATGTGGATTAAGTG10.6993006993006993No Hit
CTTTACGTCCAGTAGCCCACAGCGTCCCGCATGAGCAGCCTGCATGAAGA10.6993006993006993No Hit
ACTCTATGCTATCCTACGTTACTCTGTGCTGTCCTACTATACTCTATCTG10.6993006993006993No Hit
CACACACACACACACACACACCCACCGCACACACACCCACACACACACAG10.6993006993006993No Hit
GTGTGTGTGTGTGTCTGTCAGAAAAACCTTAAAGGACAAATGGACACTCT10.6993006993006993No Hit
GAAAGCAGGGAGATGAGAGCAGGAGAGATGAGTGGAGATCAGAGCAGGGG10.6993006993006993No Hit
GACACAAGTAAACTCATACACTGAAGCATGGACGTATAAGAAGATGCGTC10.6993006993006993No Hit
AGCGAAAGCAGGCCAACAAGTGCTCTCTCTCTTTCTCTGGTTCTCTCTCT10.6993006993006993No Hit
AACTGTACTTGTGAGAGCCTTCATTGACTGTTAAGTTGTTACACTAATTA10.6993006993006993No Hit
GTAGCCCACAGCGTCCCGCATGAGCAGCCTGCATGAAGAGGGGCTCGGCT10.6993006993006993No Hit
GAGCAGGAGAGATGAGGGGAGATGAGAGCAGGGGAGGTGAGAGCAGGGAG10.6993006993006993No Hit
GTGTGTCAGTGTGTCATTTTCTATGACAGAGAGTGATACTAGAACCTTCA10.6993006993006993No Hit
GAAGGAGTGTGTGAGAAGGAGTGTGTGAGAAGGTGAACTTAGCCCCACAG10.6993006993006993No Hit
ACATTTAACATCAAACACACACACACACACACTCACACTCTCACACATTA10.6993006993006993No Hit
CCCCTAAGGCTCCCAATCTGCTCCAGCAGGAAGCAGTTCCTAGCCAACAT10.6993006993006993No Hit
GCCCTGGCAGGTAAGAGATATCATTCATCAGGTACATTCAATTTGTGTTG10.6993006993006993No Hit
ATTCATCACGGTGGCTCCTGTTCTTTACGTCCACTAGCCCACAGCGTCCC10.6993006993006993No Hit
GTGTGTGTGTGTGGGTGTGTGTGTGTCTGTGTGTGAGCGTGTGAGTGTGT10.6993006993006993No Hit
GTACAGTGCACATGTATCTCTCATAAACTCACTATATAACTCACTAGGGA10.6993006993006993No Hit
CACACATGCATACATACATACATACATACACACACACACACACAGACACA10.6993006993006993No Hit
AATCTGGGTTCTGGAGTCTTAATACTACTATAGTCTATAGTGGCTATATG10.6993006993006993No Hit
TACAAAGACACACCACAAACATCTCTTACTATGTACAGTGCACATGTATC10.6993006993006993No Hit
CCTTCATTGACTGTTAAGTTGTTACACTAATTACATTAATGTCTCACTTG10.6993006993006993No Hit
GTCTATGCCTGTGTGTGTGTGTCTGTGTGGGTGTGTGTGTGAGTCATCAA10.6993006993006993No Hit
GTACACATTCTCATTGGTGATGCCCGCCTCCGGAGCATTCTCGTACATGT10.6993006993006993No Hit
ACACATCCCCTCTCCTCCACTCTGGAAGGAGCTGTTACGTTTGAGGCCCC10.6993006993006993No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTATTGGTTTCACTGAGTGTGAGACT10.6993006993006993No Hit
ACTCAGCTCCCTGTGCCCTCAGCTCAGTCTGTAATTCACATCAGAGGCCT10.6993006993006993No Hit
CCCCTTCCCATCTACCACACCCAATCAAAAACAAACACAGAAACAAATAC10.6993006993006993No Hit
TTACAGGACAAGGTAACATTCAGTCCTTCCTCTGTAAAGACTTCAGTTCT10.6993006993006993No Hit
CACCCCTTCCCATCTACCACACCCAATCAAAAACAAACACAGAAACAAAT10.6993006993006993No Hit
CCAGGGACAGATTTGGAAGCAAGATCCTGATCCTGTGCCCCTCACATCAG10.6993006993006993No Hit
GTGTGTGTGTGTATGTATGCATGTATATATGTATGCATTTATGTATGTGT10.6993006993006993No Hit
AGAATGAGGATAGTGAAGTATAGACCATAAAGCACATTTTAGCATGTACG10.6993006993006993No Hit
ACTATGTACAGTGCACATGTATCTCTCATAAACTCACTATATAACTCACT10.6993006993006993No Hit
GAGTAATTACAGGACAAGGTAACATTCAGTCCTTCCTCTGTAAAGACTTC10.6993006993006993No Hit
GCCCTGGAGGAGCAGAGCATGTCCCTCAAGAGGAGGCTGGCCGACGTCAC10.6993006993006993No Hit
ACTGTAATGTTGGCTAGGAACTGCTTCCAGCTGGAGCAGATTGGGAGCCT10.6993006993006993No Hit
GAATTAATACAATCATGTTACATAGAGATGCTATGATGCTAAAAATGGGA10.6993006993006993No Hit
TTCATTGACTGTTAAGTTGTTACACTAATTACATTAATGTCTCACTTGTG10.6993006993006993No Hit
AGGGAGATGAGAGCAGGACAGATGAGGGGAGAAGAGAGCAGGGGAGGTGA10.6993006993006993No Hit
CACTAATTACATTAATGTCTCACTTGTGTGCAAGTTTAGACTGAGAGCAT10.6993006993006993No Hit
GTAAAACTAAGAGGTGTGTGTTACTACCCCTCTTAGTCTCACACTCAGTG10.6993006993006993No Hit
CTTGTTCTCCTTCTCTATTTGTTCCCTCTTTCTCTCTCTCCAAAAGCCCC10.6993006993006993No Hit
GTGTGGGAGTGTGTGTGTGTGTGTGTGTGGTGTGGTGTGCAGGGCTTGTT10.6993006993006993No Hit
GATTGAGACAGAGCTGTTGCCCATTTCATTCATTGGTAGAGCATGGTGGG10.6993006993006993No Hit
TTGTTACACTAATTACATTAATGTCTCACTTGTGTGCAAGTTTAGACTGA10.6993006993006993No Hit
CTGTTAAGTTGTTACACTAATTACATTAATGTCTCACTTGTGTGCAAGTT10.6993006993006993No Hit
GAGCTGAGGGCACAGGGAGCTGATGGCACAGGGAGCTGATGGCACAGGGA10.6993006993006993No Hit
GTCCCGGGGGGGGTGGGGGGGCCGGGCCGGGGGGGGGCGGGGCGGGCGCC10.6993006993006993No Hit
GACCAATTCTTTAAAATGTATGTAGCTGCCTGATTACTCAAATCCTCTGT10.6993006993006993No Hit
TGCTAAAATGTGCTTTATGGTCTATACTTCACTATCCTCATTCTACCATT10.6993006993006993No Hit
ATCTACCACACCCAATCAAAAACAAACACAGAAACAAATACATACAAAGA10.6993006993006993No Hit
ACACGCTACAGAGGGAGGGAGAGAAAGAGACAAAGAGAAAGAGAGAGAGT10.6993006993006993No Hit
GGGATGGATGGATGGATGGAGAGGGCTGCTGAAGGCATGAGAGGAAGGAG10.6993006993006993No Hit
TTTGTGTTGTTGATGAACATAGATACTAATTATTCAGTAAAACACCATTC10.6993006993006993No Hit
GTCTACAAGGCACAGGGCTGCACTCTGCTGTGATATACTGCTGCTCTATG10.6993006993006993No Hit
GACATATATACATGCATACATACACACACACACACACACACACACACACA10.6993006993006993No Hit
TACACACACACACAGGCATAGACACACACACCCACACACACCCACAAGCT10.6993006993006993No Hit
GTGTGTGTGTGTGTGTGTGTATGTATGCATGTATATATGTCTGCATGTAT10.6993006993006993No Hit
CCACAAACATCTCTTACTATGTACAGTGCACATGTATCTCTCATAAACTC10.6993006993006993No Hit
AGTAAACTCATACACTGAAGCATGGACGTATAAGAAGATGCGTCTGTCAC10.6993006993006993No Hit
TGATCACTCGAGTCAGTCCTGTAAATCTTTTTGGAGTATTGGGTGTTGTT10.6993006993006993No Hit
CTCCCTCACTCCCTCCCTCTCTCCCTCTCCCTCTCCTTCGCTCTCTCTCT10.6993006993006993No Hit
GTAAAGACTTCAGTTCTGTCTGGAGTGATCTTGTTCCCCAAACCAACACC10.6993006993006993No Hit
CATAGTAGCCTGGCAAAATTTTGTCAATACTAACAATGAACAATATTTAG10.6993006993006993No Hit
GAGTATAGTAGGATAGCATAGAGTATAGTAGGACAGCACAGAGTAACGTA10.6993006993006993No Hit
CTCATAGGCAGCGTCTCCAAGGTGACCCCAGGAGAAGAGGAGAGAGAAGG10.6993006993006993No Hit
TGTTTGATGTTAAATGTTACACACACACACACCTGTGACGAGGAGAGTGT10.6993006993006993No Hit
AATTAATACAATCATGTTACATAGAGATGCTATGATGCTAAAAATGGGAC10.6993006993006993No Hit
CTTTACTTCTCTAGTGCCAACCAAAACACTCATCATCTGTCCTTCTCTGC10.6993006993006993No Hit
CACACACACACACCACCCACACACGCACCACCCCACACACGGACGCGGGC10.6993006993006993No Hit
GGAGCTGATCTGGGATACTGAATGTACCACTGTAGACTATCTGCAGAAGA10.6993006993006993No Hit
GGCATAGACACACACACCCACACACACCCACAAGCTTTACCTTTTGCAAA10.6993006993006993No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTATGCATGTATATATGTCT10.6993006993006993No Hit
ATAGTCTATAGTGGCTATATGTAATGGTAGAATGAGGATAGTGAAGTATA10.6993006993006993No Hit
CACACACACACCGCACACACACACACACACACACACACAGACGCTACACG10.6993006993006993No Hit
CACACACACACACACACACACACACACACACACGGACACCCCCAAGGACA10.6993006993006993No Hit
CTAATTATTCAGTAAAACACCATTCTCTTCTTCAAATCGTTTCCATTTCT10.6993006993006993No Hit
GAAGAGGGGCTCGGCTCCGTGTGTGTGCGTGTGTGTGTGTGTGTGTGTGT10.6993006993006993No Hit
GCACATGTATCTCTCATAAACTCACTATATAACTCACTAGGGACACATGC10.6993006993006993No Hit
CAGTATGGATTATTCCTAACGGTGGCTCCTGTTCTTTACGTCCAGTAGCC10.6993006993006993No Hit
CACCCACACACCCACACTCACACAGACCCACACACCGTCAGGCCCGCGCG10.6993006993006993No Hit
GAGAGGGATTAGGTCATAAAAGTAACAGAAACAAAGGGATGCATAAATGA10.6993006993006993No Hit
GTATAGTAGGACAGCACAGAGTAACGTAGGATAGCATAGAGTATAGTAGG10.6993006993006993No Hit
GGGAAGATCATCTTTTCCCCTTACTCTCTGTCTTTCTCTCTCTCACTCTC10.6993006993006993No Hit
CACACACACGCACACACACGGAGCCGAGCCCCTCTTCATGCAGGCTGCTC10.6993006993006993No Hit
CATCCAGACATAAATACATGCATACAAACACACACACACACACACACACA10.6993006993006993No Hit
GCAGGAGACGGAGCGTGCACCAACTCACCTTGGCGGTGGTGGTGGTTTTC10.6993006993006993No Hit
GATTGGGAGCCTTAGGGGAGACTGAAGCATTGCATTTATGCAACCCTTTG10.6993006993006993No Hit
AGATTAAAGTAGGAGTGACTCACAGTGAGCTCTATACTGTACTCTAGTAG10.6993006993006993No Hit
GTGTGTGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATTTGT10.6993006993006993No Hit
CAAAAACACACACAAAGGGAGACAGATTAGGTCATAAAAGTATCAGAACC10.6993006993006993No Hit
CACACACACACACACACACACACACACACCCGGTGAGAGAGACTGGGCCA10.6993006993006993No Hit
CACACACACACACACACACACACACACACACACACACACTCACACACACA10.6993006993006993No Hit
CAAGTAAACTCATACACTGAAGCATGGACGTATAAGAAGATGCGTCTGTC10.6993006993006993No Hit
ACTGAAGCATGGACGTATAAGAAGATGCGTCTGTCACTCAACTGCTGTAG10.6993006993006993No Hit
CACACACACACACACACACACACACACACACACCCAGAGAGATTATGTCT10.6993006993006993No Hit
GTACTCTATGCTATCCTACGTTACTCTGTGCTGTCCTACTATACTCTATG10.6993006993006993No Hit
CTGTTTCTACTGTAAGCCTGTTTCTACAGCAGTTGAGTGACAGACGCATC10.6993006993006993No Hit
GAGTAACGTAGGATAGCATAGAGTACAGCAGGATAGCATAGAGTACAGTA10.6993006993006993No Hit
CACACACACACACACACGCACACACACGGAGCCGAGCCCCTCTTCATGCA10.6993006993006993No Hit
AAATGATCACTCGAGTCAGTCCTGTAAATCTTTTTGGAGTATTGGGTGTT10.6993006993006993No Hit
CACACACACACACACACACACACCCGGAGAGAGATTAGGTCATAAAAGTA10.6993006993006993No Hit
CACACACACACGGAGAGAGATTAGGTCATAAAAGTAACAGAACCAAAGGG10.6993006993006993No Hit
CACTTGTGTGCAAGTTTAGACTGAGAGCATGTGTCCCTAGTGAGTTATAT10.6993006993006993No Hit
GTTTGTGTGTTTGTGTGTGTGTGAGAGTGAGAGAGGACACTTAAGACTGC10.6993006993006993No Hit
GAATGTTCCTGGCGATGATTACAGATATCACCAGAAATCAACCCGAGTGG10.6993006993006993No Hit
GAGTGATCTTGTTCCCCAAACCAACACCTTTAAACCAGAGAAATGGAAAC10.6993006993006993No Hit
TCTGAGAACAGCAGGTGTGTGTATTACCTTTCACCTTCACCTTTGACCTC10.6993006993006993No Hit
CTGGGATACTGAATGTACCACTGTAGACTATCTGCAGAAGAGTAATTACA10.6993006993006993No Hit
TATAAGAAGATGCGTCTGTCACTCAACTGCTGTAGAAACAGGCTTACAGT10.6993006993006993No Hit
GGTGTGTGTGTCTATGCCTGTGTGTGTGTGTATGTGTGTGTGTGTCTATG10.6993006993006993No Hit
AGCGAAAGCAGGGCAGCTGTCCCGTTGTGTCTGTCTGAGAACAGCAGGTG10.6993006993006993No Hit
TACATACATACATACATACACACACACACACACACATACATACATGCAGA10.6993006993006993No Hit
GGTACATTCAATTTGTGTTGTTGATGAACATAGATACTAATTATTCAGTA10.6993006993006993No Hit
GATGAGAGCAGTGGAGGTGAGAGCAGGGAGGTGAGCCCAGGGACATGAGA10.6993006993006993No Hit
CTGAGAGCATGTGTCCCTAGTGAGTTATATAGTGAGTTTATGAGAGATAC10.6993006993006993No Hit
GCTCTATACTGTACTCTAGTAGCCACCTCCACAATGTTGCTGTTTCAACT10.6993006993006993No Hit
ATACTGTACTCTAGTAGCCACCTCCACAATGTTGCTGTTTCAACTCATCT10.6993006993006993No Hit
GTGTGTGTGTGTGCTTGCTTGCTCTTGAGCAGTGTTTTTTTTTCATTAAG10.6993006993006993No Hit
GTATGGATTTTTCATCACGGTGGCTCCTGTTCTTTTCGTCCAGTAGCCCA10.6993006993006993No Hit
CATTTACAAACTGTACTTGTGAGAGCCTTCATTGACTGTTAAGTTGTTAC10.6993006993006993No Hit

[FAIL]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers