FastQCFastQC Report
Fri 2 Oct 2020
HTGTLBGXG_n02_S2_R2_F04_FD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHTGTLBGXG_n02_S2_R2_F04_FD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences105
Sequences flagged as poor quality0
Sequence length151
%GC47

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACCCTGATCCTCTCACATTCACAGTCAATGAGGAAAATTGCATCCTACTC21.9047619047619049No Hit
ATATAAACACTGCCTGTTCCGCCGGCTACTGGGAGAAACCTTGTTTTACG21.9047619047619049No Hit
TATATGTGGACTTCCCTCCGTGTTACTCCAATTTCAATGAACCGGTTCTC10.9523809523809524No Hit
GAATCAATAATTGTAGAATCTGGTGACCCGAATGCACTATTGAAGCACCG10.9523809523809524No Hit
CCACTTTTCATTTCTGCTCTGGAGGTAGTGAAGGTCTCCCATTCTCATCA10.9523809523809524No Hit
TGGGTTCACAGCTCTTAATGATAGCATAGAAATATTCTTGCTTGCTCCGT10.9523809523809524No Hit
CCCATCATCATCCCAGGCCTCAGTGATGCTGTGCCATCTATTAGAAGAGG10.9523809523809524No Hit
TATGTGGACTTCCCTCCGTGTTACTCCAATTTCAATGAACCGGTTCTCTT10.9523809523809524No Hit
TCTTCTCCTATTTCATCAAGTTCTATCCAGCTTGAATCAGTCAATTCACA10.9523809523809524No Hit
GCCATACGCACCACCGGACCTGATCCTGGCGATCCTCCATACCGACATGG10.9523809523809524No Hit
TAATTAAACTTCTCGCCTGTGCTGGTGCCCCCCCAGCTCAGAGTAGGATG10.9523809523809524No Hit
CTTCAGCAGATTGAGAGCATGATTGAGGCCGAGTCTTCTGTCAAAGNNNN10.9523809523809524No Hit
GTGGTATTCCCTCCCCCTCGTGACTCGGGTCTTCAATACTTAATTTCAGA10.9523809523809524No Hit
AACTTATACAATATACGGAATCTTCACATTCCTGAAGTCTGCTTAAAATG10.9523809523809524No Hit
GTATAAGTTTGGTCCTCCATCTGATACTAATAGCCCTACCTTTGATTGGG10.9523809523809524No Hit
ATTCAATATGGAGAGAATAAAAGAACTGAGAGATCTAATGTCGCAGTCCC10.9523809523809524No Hit
ATCCATTAGCTCCCATTTTAAGCAGACTTCAGGAATGTGAAGATTCCGTA10.9523809523809524No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10.9523809523809524No Hit
TGCACAAACAGACTGTGTTCTAGAGGCTATGGCTTTCCTTGAAGAATCCC10.9523809523809524No Hit
TTCCCAATAGAGCCTTCCTCCACTCCCCTGGGTGACTCTCCGATTGGCCA10.9523809523809524No Hit
CCAGTATCCTCAACCCTGATCCTCTCACATTCACAGTCAATGAGGAAAAT10.9523809523809524No Hit
TAATAAAACTTCTCCCCTTTGCTGCTGCCCCACCAGAACAGAGTAGGATG10.9523809523809524No Hit
AATGAAGGGAGTGTACATAAATACGGCCTTGCTCAATGCATCCTGTGCAG10.9523809523809524No Hit
AAACAGAACACACCAATACTCAGAAAAGGGAAAGTGGACGACAAACACAG10.9523809523809524No Hit
GAATGAATGAGATACCCAATTACAGCAGACAAGAGAATAAGGCAACCAAA10.9523809523809524No Hit
TCCCTAGTCTTGCCATTTTGTTTGAGAACATTATGGGTGCCATGCTCAGG10.9523809523809524No Hit
CATCACTGAGTCCTGGGATGATGATGGGCATGTTCAACATGCTAAGTACG10.9523809523809524No Hit
GTAAATTTGCTCCCTGGATGGTGGCGTACATGCTAGAAAGAGTATTGGTC10.9523809523809524No Hit
GTATGCTAGCGTCCCGGGGTCGGTTGGTTACCGACCCCCCCTCCCCGTGG10.9523809523809524No Hit
GCATTGTTCAGATCATTCCCATCACTGTGTCGATGGATTCATATACACAG10.9523809523809524No Hit
TCATTGAGCAAATCAGAGTGATCATAAATCCGTCACTCCTCGATTGCTTA10.9523809523809524No Hit
AGGTAGTTTTTTACTCTAGCTCTATGTTGACAAAATGACCATCGTCAACA10.9523809523809524No Hit
CCCTGAGTCAGTGCTAGTCAACACTTATCAATGGATAATCAGGAACTGGG10.9523809523809524No Hit
GATCTATAGCAAGCTGGGTCCAAAATGAATTCAATAAGGCATGAGAATTG10.9523809523809524No Hit
GTGTTTATAGCACCCTTGGTTGTTTGACAAGTTGTATTGCAATCGTGGAC10.9523809523809524No Hit
GCCTCATTGAATTCATTTTGGACCCAGCTTGCTAGAGATCTGGGCTCTGG10.9523809523809524No Hit
ATAATAAAATCCTCCTACATAACTATTATAAAAACTATAGTGATACAATA10.9523809523809524No Hit
CTCTACTTTTCCTAAAAATTCCAGCGCAAAATGCCATAAGCACCACATTC10.9523809523809524No Hit
CCTGCGAGGATTTCTCATTTTGGGGAAATAAAACGACAGGGGCCCCGGTG10.9523809523809524No Hit
ACTTAGCATGAAGAACATGCCCATCATCATCCCAGGACTCAGTGATGCTG10.9523809523809524No Hit
GGACAGCAGACTCCACCCCAGATGTGCCTTCATCTGGATCTTCACTCAAT10.9523809523809524No Hit
ATGTAACACAACAGGGGTAGAGAAGCCTAAATTTCTTCCTGATTTGTATG10.9523809523809524No Hit
TGTGGGAGATCAATGGCCCTGAGTCAGTGCTAGTCAACACTTATCAATGG10.9523809523809524No Hit
TTCCACTAACAGTTGATAGGGATTCAATTCCCCAGTTAGGGAACAGCAAG10.9523809523809524No Hit
TTTGCCGTCTGAGTTCTTCAATGGTGGAACAGATCTTCATGATCTCAGAG10.9523809523809524No Hit
GATAAGGGGGCCAGGCTGGGAATTGTGGGGTGAAGGATGATGAGTAATTC10.9523809523809524No Hit
GTTCATGGCCCAATCATGACTCGAACAAAGGTGTACCGGCAGCATGTCCT10.9523809523809524No Hit
GAGGGGGGGCCGGCGTGGGGGGGGGGGGGGGCGCGGGGGGGGGCGTGGGG10.9523809523809524No Hit
GAGAATAATGGCCATGATTCCAGAGACAACACTGCAACCAAACGACTGAC10.9523809523809524No Hit
CAGTAACACACTCTGTTAACCTTCTAGAAGACAAGCATAACGGGAAACTA10.9523809523809524No Hit
GGCGGGGGGGGGGGGTCTGAGCTGCGGCTGGGGGGGCGGGCGGGGCGGGG10.9523809523809524No Hit
GTCGCTAAGTGCCTGACCAATGAGCAGCAATTTTCTAGATGCAGCCGCTT10.9523809523809524No Hit
CGCATATAGACTGTTGAATACAGATTTTGCCAGTAAGGTCCTGCACACTT10.9523809523809524No Hit
TCTGAGAATAGCTGTTGCTCTTCTCCAAGCCATTGTGAATTCTTCATCCC10.9523809523809524No Hit
CACTGTCAGACTGTGGACGGTCGCAACCCGCTTTGCAGGCAGCACAGGCG10.9523809523809524No Hit
TTAGGTTTTCAATTGAAAGGGAGCCTTTTTGCTGGGGATCATAAGTAATA10.9523809523809524No Hit
GAACATAGTACTGAAAGCGAACTTCAGTGTAATCTTTAACCGATTAGAGA10.9523809523809524No Hit
ATCTAATGTCGCAGTCCCGCACTCGCGAGATACTCACTAAGACCACTGTG10.9523809523809524No Hit
GTTGCAACTACACATTCCTGGATTCCCAAGAGGAATCGTTCTATTCTCAA10.9523809523809524No Hit
CTTTTACTCTCGAACATGTAACCTTTCACTAGTCTTGCCATTTTGTTTGA10.9523809523809524No Hit
CCCAATTACCTCATGGCTTGGAAGCAGGTGCTAGCAGAGCTACAGGACAT10.9523809523809524No Hit
GTTGAGCGCGTGCTTTTGGCTGAAAGGCATGCTGGAGAGTGCGGGAGGTG10.9523809523809524No Hit
GGCTCTAAAGTTTTCAAGGCTGGGGAAGTTCGGTGGGAGACTTTGGTCGG10.9523809523809524No Hit
TATTTTCAGTGTTTGGAGGTTGCCCGTTAGCACTTCTTCTTCTTTCTTGA10.9523809523809524No Hit
GGTCTATCCCGACCAGGGAGTACCCGTCCCTTTCATAAGCAACCCTTGGC10.9523809523809524No Hit
GACGAAAGGAATGCCATAGACTCCTACTGGCCATTTCTTGTCTTATAGTG10.9523809523809524No Hit
GTAGAAACAAGGTCGTTTTTAAACAATTCGACACTAATTGATGGCCATCC10.9523809523809524No Hit
GCCTGATGCGGGCAGAGGGGGGGGGCGCTCCGAAGAGGGGGTGGGTGTGG10.9523809523809524No Hit
TCGGAGAGTCACCCAGGGGAGTGGAGGGAGGCTCTATTGGGAAAGTGTGC10.9523809523809524No Hit
ATATAGGACTTCTTTTTGCTCATGTTGATTCCCACTAACTTGCAGGTCCT10.9523809523809524No Hit
GTCACTGTTTACACCACAAAAGGATTTGCTGCTCCCGCTAGTCCAGATTG10.9523809523809524No Hit
GTTGAATACAGTTTTTGCCAGTAAGGTCCTGCACACTTTCCCAATAGAGC10.9523809523809524No Hit
GTTCAGGCGGGTTCAATGGGAGGGCTCTTTGTGGCAGAGGGGGGAGCAAC10.9523809523809524No Hit
GATCTTCATGATCTCAGAGAACTCTTCTTTCTTGATCCGTCCAGACTCGA10.9523809523809524No Hit
GCCACAATTATTGCCTCAGCAATTGACTGCTCGTCTCTCCCGCTTACTAT10.9523809523809524No Hit
CACCAATACTCAGAAAAGGGAAAGTGGACGACAAACACAGAGACTGGTGC10.9523809523809524No Hit
CTATATGTGTATCTGTAGTCTTTGATGAACAATTGAAGAGCCATCTGGGC10.9523809523809524No Hit
GAATACTGCCCGACATGACCCCAAGCACGGAGATGTCGCTGAGAGGGATA10.9523809523809524No Hit
ATAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGCACTCGCGAGATACT10.9523809523809524No Hit
AGTTTCAACAAAGTATACGAAACCTCTAATCTGCATCCCATGTGTTGCGA10.9523809523809524No Hit
ATTCATGTTCTTTGTCCTTGGGATCTACTCTTCATTTTCAATGTCCTGTA10.9523809523809524No Hit
ATCCTACTCTGTTCTGGTGGGGCAGCAGCAAAGGGGAGAAGTTTTATTAT10.9523809523809524No Hit
CTTCAGCAGATTGAGAGCATGATTGAGGCCGAGTCTTCTGTCAAAGAGAA10.9523809523809524No Hit
GGTATGAAGAATTCACAATGGTTGGGAGAAGAGCAACAGCTATTCTCAGA10.9523809523809524No Hit
GAACAATAGGGAAGAAAAAACAAAGACTGAATAAGAGAGGCTATCTAATA10.9523809523809524No Hit
GGCCATAATCAAAAAGTACCCCTCAGGAAGGCAAGAGACGACCCCCGCAC10.9523809523809524No Hit
TTTTGATGGTGATAACCGTACCATCCATCTACCATCCCTGTCCACCCCCC10.9523809523809524No Hit
GGCAAGAGAAGAACCCCGCACTCAGAATGAAGTGGATGATGGCAATGAGA10.9523809523809524No Hit
GTGAATTGACTGATTCAAGCTGGATAGAACTTGATGAAATAGGAGAAGAT10.9523809523809524No Hit
CCAATACTCAGAAAAGGGAAAGTGGACGACAAACACAGAGACTGGTGCAC10.9523809523809524No Hit
ATGAGAAGCAATTTTCTAGATTCAGCCGAAACCCCCTCAAGTTGTGGAGA10.9523809523809524No Hit
CATTATGGGTGCCATGCTCAGGATGTTTCTGAACCACTCGGGTTGATTTC10.9523809523809524No Hit
GTTCCAGCAAATGCGGGATGTGCTTGGGACATTTGACACGGTCCAAATTT10.9523809523809524No Hit
CCAATGGCCCCTCCAAGATCAAGATGAAATGGGGCATGGAAATGAGGCGC10.9523809523809524No Hit
GGGGCCCCTTTGGCCATATGCCACAAGTGGCCCTCCGGATGGCCAGAGAG10.9523809523809524No Hit
GTATATTGTCTTGGTGTATTTCTTTTGTCCAAGATTCAGTATCGAGACTC10.9523809523809524No Hit
TCTTACTATGTTTCTAGCAGCGATAATCCAACTTTGGTCAACATCATCAT10.9523809523809524No Hit
CTTATGATTGGACATTAAACAGAAATCAACCGGCAGCAACTGCATTGGCC10.9523809523809524No Hit
GGTCCGCCTGCTGCGCCCCAATGAGCACCCCGCTCACCAGAGTCAATTGG10.9523809523809524No Hit
CTATGGCACCTATATGTGTATCTGTAGTCTTTGATGAACAATTGAAGAGC10.9523809523809524No Hit
GTTGTTATCTCTATTTCCTCTTTGTTCATTGATTCCATTACATCCTTTAA10.9523809523809524No Hit
GGATACCATGGACACAGTAAACAGAACACACCAATACTCAGAAAAGGGAA10.9523809523809524No Hit
GTAACACGGTTCGAGTCTCTGAAAATATACAGAGATTCGCTTGGAGAAAC10.9523809523809524No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers