FastQCFastQC Report
Fri 2 Oct 2020
HTGTLBGXG_n02_S2_R2_F01_FD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHTGTLBGXG_n02_S2_R2_F01_FD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTACGCAACTTCCGGGACTATTCTTTGCCGTGTTTTTCGGTGGAAATTT15.0No Hit
ATGTTAATGGATGTCAATCCGACTCTACTTTGCCTAAAAATTCCAGCGCA15.0No Hit
GGGGAGGTGATCGGGTGGGAAAGGGGACAGCGAGAGATGGTTAGCAGATG15.0No Hit
CGTTTCTAACAGGTCATGGTAATGGGTTCCCACTGGGCACCCCCTCTTGA15.0No Hit
CCCCCAAAGACCAGAAAATTGCTCCAGGTCCAACTGCCCAGATCCTTGGC15.0No Hit
CTAGGCACCTTGTGTTAAGTAGAATCACAAAGTATTTCTTTTCGCAACTG15.0No Hit
CCCATAAGTTTCTCAACCACAAGGGCAAGACTAGGGCACGGGGAAAGGTT15.0No Hit
CCCTTGATGGTGGCGTACATGCTAGAAAGAGAATTGGTCCGTAAAACAAG15.0No Hit
GAGCTGGCATGGAGGCCCCACATTCAGAGTGAAACCAGTGGCTCTGTTGG15.0No Hit
GTCTTACCCGATGATAATCATCCATTAGCTCCGATTTTAAGAAGACTTAA15.0No Hit
TCTCGTGTCTACATTGCCCAAAATGACAAAACCTCTCCGGACACCAGCCT15.0No Hit
AATATATTCAATATGGAGAGAATAAAAGAACTGAGAGATCTAATGTCGCA15.0No Hit
CACCAAGACAATATACTGGTGGGATGGGCTCCAATCATCCGACGATTTTG15.0No Hit
GGGGTCAAGGAAGAATTTATAATTCTTGTAGTTGGATTTCTCCAGATCGG15.0No Hit
GGACGACACAACGCCCCCGCAGCTTTCAGGCTGGGCCGCGGTGCCATCAG15.0No Hit
CATCGATCCTCCACTAAACGCACAGGCAGACAGCATCCATGTTAACGAGG15.0No Hit
GAAGTGGAAGATGGCAAGGATATACCCAGTTACAGCAGCCAAGAGAATAA15.0No Hit
GCGAAATTCGAAACTAAAAAGTTTTCAGCTATAAGCTGACAATTGCTACT15.0No Hit
ACAGACAACAAGGCAACCAAACGACTTACAGTTCTTGGAAAGGATGCAGG15.0No Hit
TCCTTACTCCTCCAATCTGTGTGCTGTGGCACATTTCCAAGAGAGATGCT15.0No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers