HTGTLBGXG_n02_S2_R2_F01-FD.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HTGTLBGXG_n02_S2_R2_F01-FD.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	382724
Sequences flagged as poor quality	0
Sequence length	151
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ATGTAATACCTATCAAAATACCAATAACACTTCTCACAGAACTAGAACAA	1192	0.31145159436042685	No Hit
GTATAGACATCTTAACAATATTGTTCTTCCAATCCATGAGCATGGATTGT	671	0.17532216427503894	No Hit
CCTTAGTACAACTTTGTAGTATAACTTGAAGTCTGGAACTTGATACCTCC	619	0.1617353497559599	No Hit
GTATTACATCAAATATGTAGATTTTGGGTAGTATAGACATCTTAACAATA	555	0.1450131165017088	No Hit
GTTTATATGAGAAAGGAGGGGAATGAAAGAGAAAATAGAATCAAAACACC	389	0.101639823998495	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGCGAAA	40	6.646985E-5	72.52407	1
ACGGGCG	30	0.0019332814	72.51459	145
GCGTAAC	50	2.0053725E-4	58.01926	1
TAGGCGT	40	0.006062016	54.343285	4
TATACGT	60	4.955464E-4	48.305145	4
CGAAAGC	80	3.7374004E-5	45.297913	3
ATACCTA	535	0.0	37.91684	6
ACCTATC	570	0.0	35.588615	8
TACCTAT	570	0.0	35.588615	7
CCTATCA	605	0.0	34.72272	9
GACAGTA	105	1.8593683E-4	34.49917	7
TAATACC	640	0.0	33.964554	4
TATACCA	215	4.8930815E-10	33.696857	5
CGTGCTA	90	0.003638153	32.199223	8
TGTAATA	655	0.0	32.097298	2
GTAATAC	710	0.0	31.644741	3
TGTATAC	95	0.0047250804	30.52447	2
AATACCT	695	0.0	29.187784	5
GCGAAAG	150	4.393502E-5	28.99825	2
ATTACCC	150	4.4013468E-5	28.990665	3