FastQCFastQC Report
Fri 2 Oct 2020
HTGTLBGXG_n02_S2_R2_E04_FD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHTGTLBGXG_n02_S2_R2_E04_FD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences101
Sequences flagged as poor quality0
Sequence length151
%GC48

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACTTATGACTACCCAAAGTACTCAGAGGAAGCAAAATTAAACAGAGAAGA10.9900990099009901No Hit
GCAATCTGTCTGTGAGACCGATGCTGTGAATCAGCAATCTGTTCACAAGT10.9900990099009901No Hit
ACCCAGGTGCCCCGCAATTTTCGCTTTTGAGCTGTTAGCTTTAAAATTCA10.9900990099009901No Hit
ATCCCGGAGCTCTTCTTTCGTCTCTTTTGGTATTGCCCGCTGTGACGCTG10.9900990099009901No Hit
CTTTGACCGAAGACTCGGCCTCACTCATGCTCTCAATCTGCTGAAGCGAC10.9900990099009901No Hit
TGCAGGTCCTGTAGAATCTGTCCACTCCTGCTTGTATTCCCTCATGGTTT10.9900990099009901No Hit
CGCTGTTTCACGCCACGCTGTGCAGCCCTGTGGCAATTACAGAATTCATC10.9900990099009901No Hit
GATGATCCGCTTGTCCTTTTGAAAGTGAACCCACCAAAACTGAAAGATGA10.9900990099009901No Hit
CACTAAAAAGAGGAGAGTAGGGGGCGTCTGAGTGGCTCAGGCCATGATCC10.9900990099009901No Hit
CTATAAGCACCTATTTTCACACCGTATTTATAGCGACGATAAATACATTT10.9900990099009901No Hit
TCTTTTGACATTTGGGAAAGCTTGCCCTCAATGCAGCCGTTCGGCTCGAA10.9900990099009901No Hit
GATCATTTGAGTTAAAGAAGCTGTGGGATCAAACCCAATCAAAGGTAGGG10.9900990099009901No Hit
ATGATGGGCTTTCCATAATACAGAACCTTGCGGATATCCATTCATTACAC10.9900990099009901No Hit
CTAATAGCCCTACCTTTGATTGGGTTTGATCCCACAGCTTCTTTAACTCA10.9900990099009901No Hit
GGACCAAACTTATACAATATACGGAATCTTCACATTCCTGAAGTCTGCTT10.9900990099009901No Hit
CCTTTGGCTTGTGTTGAGAATAGAACGATTCCTCTTGGGAATCCAGGAAT10.9900990099009901No Hit
GCATAGTGTTACGCAGTTAAAGCATCAGTCACAAGGGAAAATGAGCTTTT10.9900990099009901No Hit
CGGTTATCCCATCCATAAAATGGGGACACTGGCAGTGTCTGAAGGCTCTT10.9900990099009901No Hit
GGCCAGGTCAGTGTGGGGCCGGGCTTCTCGGTGCCGCGGGGGCGGGGTGG10.9900990099009901No Hit
GACATATGAAAGGCAGCAATAGGGTTGAGGATTAGCGCAGCTTTCAGTTT10.9900990099009901No Hit
GACTATAAGTGTACATGAAGGGTATCAAGAATTCAATATGCTTGGCAGAA10.9900990099009901No Hit
GTGCTGAATAGTGTATGGGGGGGGGGTGGATGAGGGGGGGGTTGCGGGGT10.9900990099009901No Hit
CCTATATGCACTGCGAGGGAAAAATTTCTCGAATAGATTGCAGCACTTCT10.9900990099009901No Hit
GTATGTCCTGGATGAGAAGGTAATGGTGAAATTTGTCCAACTATTGCTCC10.9900990099009901No Hit
CCTGGATGGGTTCATTATAAAAGGAAGGTCTCATTTGAGAAATGATACTG10.9900990099009901No Hit
GGTACCTGTTCATCCTCAAGCATTCCCCTTTGGCTTGTGTTGAGAATAGA10.9900990099009901No Hit
CATATAGACTGTTGAATACAGATTTTGCCAGTAAGGTCCTGCACACTTTC10.9900990099009901No Hit
GCTCAAAAGAGAAATAACGTTCCATGGGGCCAAGGAGGTGTCACTAAGCT10.9900990099009901No Hit
CTTAAAGGATGTAATGGAATCAATGAACAAAGAGGAAATAGAGATAACAA10.9900990099009901No Hit
AGCAAATGTAGGACCAAAGAAGGAAGACGGAAAACAAACCTGTATGGGTT10.9900990099009901No Hit
CTGCTTCACTGCAGGAGAAAACAGACAGGAGACACTGGCCTCCGATGGAG10.9900990099009901No Hit
ACCATGGACACAGTAAACAGAACACACCAATACTCAGAAAAGGGAAAGTG10.9900990099009901No Hit
CCCCTAACTGCCTTGATCATGCAATCCTCCTGTGAGAATACCATGGCCAC10.9900990099009901No Hit
TTGTTATGCTATTCTGGAGTAGTCGTCCCTCATAATCCCTGAGTGTGAGT10.9900990099009901No Hit
GAAGAGAACAGTGTGAGCACAGGACAAGTCGAATAGTCCTATATTTGTGA10.9900990099009901No Hit
ATATAGTGGTATTCCCTCCCCCTCGTGACTCGGGTCTTCAATACTTAATT10.9900990099009901No Hit
ACGTTATTGTATGTCTGTGGGTGTAAGCAGCTGTGCCAATCCTTCTGGAA10.9900990099009901No Hit
CGGTCAAATGTCCCAAGCACATCCAGCATTAGCTGGAACACTGTCCTTAC10.9900990099009901No Hit
TCATGATGCTTTTTATCTGGTTGTTATCATAGCAACTCAGTCGGAGTCTG10.9900990099009901No Hit
GTGTAAGCAGTGTTTGGTTGGAACCCAATTTTTCCTGTTCAGAATGCTGA10.9900990099009901No Hit
CTTAGCTGACTGAGCCACCCAAGTGCCTCTAGATCTCGTCCTTGATGCTT10.9900990099009901No Hit
GGATGTGCTTGGGACATTTGACACTGTCCAAATAATAAAACTTCTCCCCT10.9900990099009901No Hit
TTTTCATTCACTGGAGAGGAGATGGCCACCAAAGCGGACTACCCCCTTGA10.9900990099009901No Hit
CTTCATTATGTATTCAGTAGCCCTGCAGTGGGACACTTCTGCTGTAAAAT10.9900990099009901No Hit
TCACAGTGCTGTTGTTTTTCAGGGGAGAAGACATTCTCAGCATCCATACT10.9900990099009901No Hit
TAGTGCAAGTGAACAGCTATACCGGTAACCTCAAAAGAGAAATGGGGATG10.9900990099009901No Hit
ACTCAGTGCGAAGGAGGCAGAGGATGTGATTATGGAAGTTGTTTTCCCTA10.9900990099009901No Hit
AATCCGGGGGCTCCCTAAACTGGCCAAGGACCCCAGGAAGCCCACCTGTA10.9900990099009901No Hit
ATCATTACTATTATTAATCATCAGTACCTAGCTGAGCTTGACTCGCATCT10.9900990099009901No Hit
GTCTGGGCTCCCAGTAGGGGGCAATGAAAAGAAGGCCAAACTGGCAAATG10.9900990099009901No Hit
CGGAGATGTCGCTGAGAGGGATAAGAGTCAGCAAAATGGGAGTAGATGAA10.9900990099009901No Hit
GCAATTTACAAGGACCCAATAGCTAAGATTGAAGGATGATAGCTGGTGAA10.9900990099009901No Hit
CTATTGAAGCACCGATTTGAGATAATTGAAGGAAGAGACCGAATCATGGC10.9900990099009901No Hit
GTGTGGGTGGCATGCGGCGCGGCTGCATTTGCAGAGTTAAGAGTATAGTG10.9900990099009901No Hit
GATTGATTATCGCTCCTAGAAACATAGTAAGAAGAGCACCAGTGACAGCA10.9900990099009901No Hit
TGAGAAAGGAGTTGGATGAGCGGTGCGGCGTTGAGAGAGAATTGAGGAGT10.9900990099009901No Hit
CAGGTAATCTGACGGCGCGTGGTGTCGTCCTCAAGAATGGTTCAATTTTG10.9900990099009901No Hit
GAAATACACCAAGACAATATACTGGTGGGATGGGCTCCAATCATCCGACG10.9900990099009901No Hit
AAATACAGAGACTTAACTCACTGAGCCACCCAGGTGCCCCTTAGGATTTT10.9900990099009901No Hit
ATCCTTACTCCTCCAATCTGTGTGCTGTGGCACATTTCCAAGAGAGATGC10.9900990099009901No Hit
GACCAAAAGCAGATTCTGTGGTCACTGTTCCCATCCTCTTGTATATGAGG10.9900990099009901No Hit
ATCTGCAGGTTAGATCTGCCCCGAGAGTCCCAGCTGGTCCCCCGGGTCTC10.9900990099009901No Hit
CTTCACAGCTGAGGAGGCTGAGACCGACGAGAAAAGGGTCTGGTCCGAGG10.9900990099009901No Hit
ATGTGGAGGGCGAGTTGGGGGCGGGGCGGGTGTGTGTGGAGGGGGGGGGG10.9900990099009901No Hit
TTTCTGAACAACTCGGGTTGATTTCTGGTCATATATGTAATCATCGCCAG10.9900990099009901No Hit
GAACTATTAGAACTTCATTCCTTTTTAAGGTTAAGTAATAGTCCATTGTG10.9900990099009901No Hit
CCTTTCTGACATGACCCTCGAGGAAATGTCACGAGACTGGTTCATGCTCA10.9900990099009901No Hit
AAAATAACAGTCCTGGCAAGGATGCGGAGGTAGAGAAACTAGAACACTTA10.9900990099009901No Hit
CTCCAAAGCTGGGTAGCTCCATGCTAAAATTAGCCACAAATCCATAGCGA10.9900990099009901No Hit
CCAGGATATTGTGTTGGGGTATTTCTTTTGTCGAAGATTCAGTGTCGAGC10.9900990099009901No Hit
TGATTATCGGGGAAGACTTTGTAATCCCCTGAATCCCTTTGTCAGTCATA10.9900990099009901No Hit
CCAAGAGGTCTGGGGATGTGGGAAGCTTATAGGTAGGTAACAGATGGAAA10.9900990099009901No Hit
GTATAAGAGTCAGCAAAAGCGCAGGAGAAGAATACACCAGCAAGGAGAGA10.9900990099009901No Hit
CCCTTAGACGCAGAGCCAAGCGGGAGTGGAGAGGCGACTCTTTTCCTCAA10.9900990099009901No Hit
TCAGGAACTGGGAAATTGTGAAAATTCAATGGTCACAAGATCCCACAATG10.9900990099009901No Hit
GTTCATTGATGCTTAATTCTTGGCCATATCTATTCTCTTCTTAGCAGAAA10.9900990099009901No Hit
TTTCTAGACCATGCCCGGCCGAGGAGCTCTTCCAGTGAGGCTCGAGAGCG10.9900990099009901No Hit
CCCTTAAAAATCGGTCAATACTCACTACCACTCTCTCCGTGCTGGAGTAT10.9900990099009901No Hit
GAGGGAAAATTGGAAAAGCTTTTCTTCAAAGTCTATTTCAGGTGCAAGCT10.9900990099009901No Hit
GCGGGGGGCTTGGGGGGGTGGCGGGCAGGGGTCCGGGGGTGGGGCTCGGG10.9900990099009901No Hit
GTATCAGATGGAGGACCAAACTTATACAATATACGGAATCTTCACATTCC10.9900990099009901No Hit
CACCACTACCCTCTCCGTGCTGGAGTACTCATCTACACCCATTTTGCTGA10.9900990099009901No Hit
AAGTTCACCACATCAGTATCATTTCTCAAATGCGACCTTCCTTTTATAAT10.9900990099009901No Hit
GTATCGTAGACTTTGTTGAAACTTTAGCTATTAGCATGTGCTAAAAGATT10.9900990099009901No Hit
AGTCACGAGGGGGAGGGAATACCACTATATGATGCAATCAAATGCATGAA10.9900990099009901No Hit
GCTCTGGAGTGGGAGCTGGAGCCGGAGCCGGAGCCACGTCTGGTTCTAGA10.9900990099009901No Hit
GGGGTGGCACCGCTGGGGAGGACACGGCCACCACAGGCTCCTCTGGCTCA10.9900990099009901No Hit
GCCTGAGGAAGATGCAAGGTCTGAGGGTACACAGGATTCCCAGGAGGCTG10.9900990099009901No Hit
GCCCAGGTGGGCAGCCCCATACGTTTGGGTAGCGTCCAAAGACAGTAAAC10.9900990099009901No Hit
CTGCTGTACCACAGGTGAGCCTTGAGGGTATTCCGCCAAGTAAGATATGC10.9900990099009901No Hit
GACTAATGGAATAGCCAAGTTAAATAGTAACACCAATTAATTGGGGAAAC10.9900990099009901No Hit
ATAAAGTAGTTATCCAAAATGGAATACTTTGTGCTACAAACCTTCTTTAC10.9900990099009901No Hit
GAAGCGGAAGCTGCTGACAGGGAGGTGACTGTAGACGGGATAAGAGGCCG10.9900990099009901No Hit
TAAGTACACAAATAAAGAAAAAACGTAAAAAAAAAACTGCCCCACGACCA10.9900990099009901No Hit
GCCAGTGTCCCCAGTTTATGGATGGGATAAGCGAGGCAGCAGAGTCGTGG10.9900990099009901No Hit
GTGCCAGCCTGGCCTGCGACATGCCATGGAGGGGATTCGTGGGCCCGGGG10.9900990099009901No Hit
AGGGCGGTTTTAAACAATTCTAAACTAATTGATGGCCATCCTACTTCTGG10.9900990099009901No Hit
AGCAGGTACTGATCCAAAATGGAAGACTTTGTGCGACAATGCTTCAATCC10.9900990099009901No Hit
GACCAAGACCTGAGCCGAAGGCAGATGCTTAATGACTGAGCCACATGTGG10.9900990099009901No Hit
TACAAACCCTGGCCATGCAGATCTCAGTGCCAAGGAGGCACAGGATGGGA10.9900990099009901No Hit
GAGTGACATCGAAGCCATGGCGTCTCAAGGCACCAAACGATCATATGAAC10.9900990099009901No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers