FastQCFastQC Report
Fri 2 Oct 2020
HTGTLBGXG_n02_S2_R2_D04_FD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHTGTLBGXG_n02_S2_R2_D04_FD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences104
Sequences flagged as poor quality0
Sequence length151
%GC51

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCGGGCCGGGGTGGTGGATTTGGGGCGTGGAGGGTGGCGGGGGTCGGGCG10.9615384615384616No Hit
GGTTAGAGAAGCCTAATTTTATACCTCATTTGTATGATTTCAAAGAGACC10.9615384615384616No Hit
GGAAAGGCAGGATGCTCTTCTTGCCCTTGTTGGCTGCGGGGAAACAGGAA10.9615384615384616No Hit
GCCTCGTTGCCCTCAGGGGGCCTAGTTCCGGCTGAGGGGTGGTGTGATAT10.9615384615384616No Hit
TGGATGCACAGGGCTGACCGGAGTTGCCAGCCATAAAACCATCAAACATT10.9615384615384616No Hit
ATGCTCCTGTTATCCTGATTCTAGTGAAATCACATGTGTGTGCAGGGATA10.9615384615384616No Hit
GGCTGGACCTGTCCGGGTCCCCTGGGCAGAGGCAGTAGTCAGGGGTTTTA10.9615384615384616No Hit
CCTTGGAGAAGGACCTGCATGCTGGGGGTGATATTGGGAAGGGAGACACG10.9615384615384616No Hit
TATCTCAACAGCCACTATTGGTTGGAAAAAAATCGTTTAATGGATCTTGA10.9615384615384616No Hit
NCAGTATATTGTCTTGGTGTATTTCTTTTGTCCAAGATTCAGTATCGAGA10.9615384615384616No Hit
CCCATAAGCAATGTTGTCCCTCACAGAACCCGAGAAGAGCACAGGCTCCT10.9615384615384616No Hit
ACATATAGGAACATGGGCCTCGACACTTGGCCTATCGCAGTCCTCAAGAG10.9615384615384616No Hit
GCCCTTGGGATTAGTTGTTAATTAAGTGTTGGTTTTTAGTGGGTGGTGAG10.9615384615384616No Hit
GGAGATGGCCACCAAAGCGGACTACACCCTTGACGAAGAGAGCAGGGCAA10.9615384615384616No Hit
TCCCAATGATATTTGCTGCAATGACGAGAGGATCACTTGAATCGCTGCAT10.9615384615384616No Hit
GCTCCAGCCAGCAATGTTACATTTACCCAAATGCAATGGGGCTACCCCTC10.9615384615384616No Hit
GGCAGAGGGGGCCCCCTGTCCGACACAAGACGTCTCGGACGCATCCTGCA10.9615384615384616No Hit
ATAAGGTATATTGCATTAAAACCCTCGGTGGAGTTTGATGCAACCTGTCA10.9615384615384616No Hit
ATACTGGAGATCCACCATAAAGCCATGTAACAGGAACAGGATAAACCATG10.9615384615384616No Hit
CTATCATCACGTCAGTCCCCCTCAACTCCTCTAGCGCGCATAGACGTGAA10.9615384615384616No Hit
GGACCAGGAGCAGGAATTGGATCAGGTGCAGGAGCAGGTGCAGGAGGAGG10.9615384615384616No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10.9615384615384616No Hit
GATTTTGCCAGTACCCTTCAAAGTGATTGCTTATTGCAGGCCCATTGAGT10.9615384615384616No Hit
GTACAAAACCAACCATTATCTTTATGGAGGCCATTATTGTTACTAATTCT10.9615384615384616No Hit
GGGGTGGGGTACAAATGGGCTCAGCTCCGCAGGTACAGGGGTGGGCTTGG10.9615384615384616No Hit
CCCCAAAGAACAAAGACGAAGAGGAAAACTGGAGAAAAAAGATAAGAAAA10.9615384615384616No Hit
CTCTATTTATCTGATATGTGTCCTCATTCAGCTTGCCATGCCAAATCATC10.9615384615384616No Hit
AGCTTGAATCAGTCAATTCACATGCCTTATTGAATTCATTTTGGACCCAG10.9615384615384616No Hit
TCCATTAGCTCCCATTTTAAGCAGACTTCAGGAATGTGAAGATTCCGTAT10.9615384615384616No Hit
ACGTTTCTTTCACTGATGAAGTAAGAAAAAAAAGAAGTCCACTGGATTAT10.9615384615384616No Hit
GGCCTTGCTAACCAAATCCCACAGAATCCATTCGCCACTTCTTTTGCATA10.9615384615384616No Hit
CAACATGGATAGAGCAGTTAAACTATACAAGAAGCTCAAAAGAGAAATAA10.9615384615384616No Hit
CAGTTGAATAGCTTAGTGCCACCTCCTTGGCCCCATGGAACGTTATTTCT10.9615384615384616No Hit
GTGAATGAGTATTCCCAATAAGAATTTCGAGATGCATTTAAAACTTTTGC10.9615384615384616No Hit
GATCAACCTTATGGCACTCCAAGCTGCCATCCAGACACCCATCTGGCTGA10.9615384615384616No Hit
GGATTTCCTTACGGTGATGGCCGTAAGGGGCCTCCAACCCCCCCCGGTGC10.9615384615384616No Hit
AATATAAAGTTTCGAATGCTGAGTAAAGAAAATTTCAATTTAAAATGATG10.9615384615384616No Hit
CTATTAGCCTTCCTGACTCATTAGCTGTTAGGCCATTCGATCTAAAGACT10.9615384615384616No Hit
TCCCAGTTCCTTGCGTTTCACTGACTTCTTCGGGAGACAATAGTACGTTC10.9615384615384616No Hit
GGCCAAGGGAGGAGAGCATCTGGCTTCTATCCGAGTTGTGTGTGGGAAGG10.9615384615384616No Hit
TCATTACCAACACTTCGTCCGCTTGCCAAATGAGCACAGTAGCGTTCCCG10.9615384615384616No Hit
GTCCGATACGCTGGGGCTGAGAGGCAGATGGTGGGGGAGGAGGGGCGGGA10.9615384615384616No Hit
CCCTTGATGCTCAAAGAGCTCTGCAGAAACCAAGATTTTTCTAGAATGTG10.9615384615384616No Hit
AGACAGCCATTGAACCTTACACGGATCCACCAGGGAAACAGTAAACAGAA10.9615384615384616No Hit
GGTTTAAACATGTTACCATCGGCCCTGACCAAATCAGAAAACAAGTTAAA10.9615384615384616No Hit
GTTGTAGGTGGCGCCTGCTGTGAGCATCTGTACGAATTTCGAGTTTTTGT10.9615384615384616No Hit
AGTGAACAGGCAGCGGAGGCCATGGAGGTTGCTAATCAGACTAGGCAGAT10.9615384615384616No Hit
CCCACATCATTGATGACGAATAAGTTATTGTCAACTTCTCAGTTCCTTGC10.9615384615384616No Hit
AAGCAGGGGATGCTGCAGGCAGAGAGAGAAGCAGGCTCCCCACTGAGCAG10.9615384615384616No Hit
GGGCGATCCCGCCCAGTGCGTCCCCTTCCCTGTCAAAGTCCGGCCCCCTT10.9615384615384616No Hit
GCCCCGGATATTGCTGAGTTGACGGAAAGTGGCTGAGCGATCTCATCCGG10.9615384615384616No Hit
CCTCCTGGAGTGTACATCTGCTCCCAGCCCGTCCCTTGGGTTAAGTGCAA10.9615384615384616No Hit
GAGCTAGGATGAGTCCCAATAGTTCTCATTGCATGTACCATCTGCCTAGT10.9615384615384616No Hit
CTCCTCGATTGCTTCATATAGCACCCCAAGCTCGAGGGTTCAAGGTTCCA10.9615384615384616No Hit
AGTAGCAGCAAGGTACTTTTTTGGACAGTATGGATAGCAAATAGTAGCAT10.9615384615384616No Hit
GGATAAGATGAGCCTGAGAAACAGGCTGAGGCATGAAATCAGAAGATGAG10.9615384615384616No Hit
ATAGTAGCATTGCCACAACTACTTCAGTGCATGTGTGAGGAAGGAGTTGA10.9615384615384616No Hit
GTGATAAAGAACAACATGATAAACAATGACCTTGGACCTGCAACGGCCCA10.9615384615384616No Hit
TTCTCTATCTGTGGGGAGCCATCCTGGCCCCGGATGACATGGGCAATGGT10.9615384615384616No Hit
CTATATCAACCCGTCGCCGCGGTGCTCACAGTTTTGGTATGCTTGTTTTC10.9615384615384616No Hit
CTGTAGGACCTGTCCGCAAGGACTCCAGAAGAGCGCCTGCTGCGTCTGAA10.9615384615384616No Hit
GGAGAGACGAGCAGTCAATTGCTGAGGCAATAATTGTGGCCATGGTATTC10.9615384615384616No Hit
GGGGGGGGTGGCGGCCAGGGGCGCCGGGGGGCGGGCGGGGCGGGGCCGAG10.9615384615384616No Hit
TCGGGAGACAATAGTACGTTCCCTCTTTGATCTCTAACCCTTAAAAATCG10.9615384615384616No Hit
CTGCAGGAATGTGAAGATTCCGTATATTGTATAAGTTTGGTCCTCCATCT10.9615384615384616No Hit
GTTCTGATGGCTGTTGTACGCTGCTAGTCTTACAGTGTTGGTTGCAGGGT10.9615384615384616No Hit
TTCGGGCGGGGTGCCGCGTGGGCGGCGGCGGTGGGCTCGGGCGGGGGGCG10.9615384615384616No Hit
ATACAGAGATTCGCTTGGAGAAACTGTGATGAGAATGGGAGACCTTCACT10.9615384615384616No Hit
GCGCTAGCGAGCGAAACAGTGAGGAGACCCTGCCGCGTGCAAGCAATATA10.9615384615384616No Hit
TTCTCAGTTTGGGCAAAGAAGACAAGAGATATGGCCCAGCATTAAGCATC10.9615384615384616No Hit
CATCGTGTGCAGCCATGGATGACTTTCAGCTGATCCCAATGATAAGCTAA10.9615384615384616No Hit
GGCAGGTAAGGGACCACGAGGGCATGTAGCTTAGCTAGCCGTCAACCCCA10.9615384615384616No Hit
TCCGAATTCTTTTGGTCGCTGTCTGGCTGTCAGTAAGTATGCTAGAGTCC10.9615384615384616No Hit
GTATGCTAGAGTCCCGGTTTCGTTTGAGTACCAACACTTAGTCCCCGGGC10.9615384615384616No Hit
GGAGCAGCAAGGGCGTGTTTACACAAGTCGAAACGAAGTGATGGCCAGAC10.9615384615384616No Hit
GGCTCCATCTTGCGATCCGGAGATCGTGACCTGCGCTGAGCCGCTTGCCT10.9615384615384616No Hit
ATCTTTCTCACAACATTTGCGAGTTTGGGCTTCTTTTCATTGCCCCCTAC10.9615384615384616No Hit
CAGGTGATTATTGTTCTTTCTCCCCAAAGTAGTCTTTCCTGATGTCTGAC10.9615384615384616No Hit
GAAGCAGGTGCAGGAGCAGGAGCAGGTGCAGGAGCAGGAGCAGGTGCAGG10.9615384615384616No Hit
ACACAGAGATTTCTTTCACAATCACTGGGGACAACACTAAGTGGAATGAA10.9615384615384616No Hit
GGGTCTTTGCAGTATGCTCGAGCCTGATGGTGTCACTTTCACAGGCTATG10.9615384615384616No Hit
CCTCTCGTTCCCCCCCAAAATGCTGGTTGGAGCAGTTCTGCTTGGGGTCA10.9615384615384616No Hit
CATATATCCACTTCAGCTCCCAGTAACAAAGATGGTGAAATTGTTTCCAT10.9615384615384616No Hit
CTCTCCAGGGGGGTTGTGAGACTCTGACGATCTTCCCATTTACAGTGGGG10.9615384615384616No Hit
CCCCAAGGGGGGTGCAGATTGGTTCATATGAGATTGTGGAAGCCCTGGGC10.9615384615384616No Hit
CCTGAATCCCGTTGTCAGTCATATAGAGATTGATGCTGTAAACAATGCTG10.9615384615384616No Hit
AGTCATGAATCACTGTGGCATTTGCCAAGGCATTCTCCCATCTGGAAGCA10.9615384615384616No Hit
GAGGGCCTATTATCTTTTGCCTAGGCATGAGCATGAACCAGTCTCGTGAC10.9615384615384616No Hit
GTGCAGGAGCCGAATCAGGTGCAGGCGGAGGACCATGAGCAGGCCGAGGA10.9615384615384616No Hit
GACTTTGATGACTGCAAAGATGTTGGAGACCTTAAACAGTATGACAGTGA10.9615384615384616No Hit
CCAAACAAAAAGGCGAAGATCCGAAACTCGAAGCTAAAAATTTTCCACAA10.9615384615384616No Hit
GGGGTTTACACACACTGCCTCCTTGGTCTAGATGCTAGGACAATCGGTGA10.9615384615384616No Hit
GGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGCGGGGGGGGGGGGGGGG10.9615384615384616No Hit
AGGAAGGTCTCATTTGAGAAATGATACTGATGTGGTGAACTTTGTAAGTA10.9615384615384616No Hit
GGATAGACCCATTCATAGTACTCCAAAACAGCCAAGTGGTCAGCCTGATT10.9615384615384616No Hit
GAAATTAAGTATTGAAGACCCGAGTCACGAGGGGGAGGGAATACCACTAT10.9615384615384616No Hit
ACGGTAGCGGGAGCCCCCAAAGGAAATGCCTTTTTCCTGGAAGCGGCTGT10.9615384615384616No Hit
GCGGGGGGGGGGGCGGGGTTGGGGTGGTGGCCGGGCGTGGGGGGCGGGGG10.9615384615384616No Hit
CAGGAGAGGTGTGAGAGCCTGGTGGACATTTATTCCCAGCTGCAGCAGGA10.9615384615384616No Hit
GTTCTGGAAAAGCACTTTTGCATCTTTTTGGAAATGCCTCAAGAGTTGGT10.9615384615384616No Hit
TTATAGTAAAGAAATCTGATCCATAATCCCTAACCATCCAGACTCCCACT10.9615384615384616No Hit
CGGTGGTTGGGTGTCCTCGACCCTCGCTTCTGTGGGCCATCTTGCCTGGT10.9615384615384616No Hit
GCTTGATGACTGAGTCATGAAGGAACCCCTGAGTACAACTTTGTAGTATA10.9615384615384616No Hit
CTCTTAGATATCTAACCCTTAAAAATCGGACAATACTCACTACCACTCTC10.9615384615384616No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers