FastQCFastQC Report
Fri 2 Oct 2020
HTGTLBGXG_n02_S2_R2_C12_FD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHTGTLBGXG_n02_S2_R2_C12_FD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTCTACACAGAAGAGACCAATTAGAGCACATCCAGAAAATCATTCCACC14.761904761904762No Hit
CTAACTGCTCTCCACTCGGGAACCCACGCCAATGGCCAGAGACGCCGTGC14.761904761904762No Hit
GTTGTAAGGCTTGCATAAATGTTATTTGTTCGCAACTATTCTCTGTCGCT14.761904761904762No Hit
ATTCAATATGGAGAGAATAAAAGAACTGAGAGATCTAATGTCTCATTAAC14.761904761904762No Hit
TCTGTAACTCATCTTCAGTCCCTATTACTCTCTAATTGGTGGATATAAGG14.761904761904762No Hit
TGGCTGTGCTAAGGGCGGCTTCCCAGACTTGGTTCGCGGGCCCCGCGGTC14.761904761904762No Hit
GTGCCGTGGGAACACCGTGAGAAGCTGGCTGGCCCCCCGACAGAACTGAT14.761904761904762No Hit
CATCATTATTTGATTTCATGACCATGACCTTTAGTAAAGAGTAGATGCAA14.761904761904762No Hit
TGCCGAAGGTTTGCCTAGTTCTATTGGCTCCCTGAACCCCCCTTGAATTT14.761904761904762No Hit
TGCTTGGTCAATGGCCAGAGCCAGCTGTAAGCAGAGAATTCCCGGGGGAA14.761904761904762No Hit
CTTTTATCGTCCAGGAACACCACGTGGGGGAAGTCCTGATCTCCATCTCT14.761904761904762No Hit
GACTGATGAAGGGATCAATCCCAGGACTCTGGGATAATTACCCGCGCTGA14.761904761904762No Hit
GTTCGTTACCCTAGTGGGTGAAACCTTCTTAAACGGACGAAATGTCTTAA14.761904761904762No Hit
GGATTATCTATAGCCAATAGCTGCAGTCCTGGTATACTTTCATGTTAACA14.761904761904762No Hit
ACAGTGTCCTTACGAATCCACTGAGATCTGCCTGGCCAGGGTTTGTATCA14.761904761904762No Hit
GGGGCCGGGGGAACACCGTGCGCAGCTGGCTGGCCCCCCGACAGCACTGA14.761904761904762No Hit
GTAATTTCCCTCATTCAACTCAAACCCTTATAAATCGGTAAATAATAACT14.761904761904762No Hit
GCATTAGTGAGGCCGAGGCTGCTGTCAAAGTGAAAGACATGACCAGGGCG14.761904761904762No Hit
AGATTTCCAGTTGCTTCGAATGTTATTTTGTCTCCCGGCTCTACTAGTGT14.761904761904762No Hit
CTGCTGTTCCTGTTGATATTCTTCCCTCATGGACTCAGGCACTCCTTCCG14.761904761904762No Hit
GCTATAGAAACCTACTCAAACGCTGTCAACATAACGTTAAAAAACGTCCC14.761904761904762No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)