FastQCFastQC Report
Fri 2 Oct 2020
HTGTLBGXG_n02_S2_R1_H09_FD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHTGTLBGXG_n02_S2_R1_H09_FD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences144
Sequences flagged as poor quality0
Sequence length151
%GC47

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CATCCACTCCCCTGTGTGACTCTCCGATTTGACATGTTTCCGATTTGTTT10.6944444444444444No Hit
TCGTCGATCTTGATGGAAAGGAAATGAAATAATATGGGGAAGTTCGGAAA10.6944444444444444No Hit
GAGCAACCTACTGTCCTCTATCCACAATTCCAAATTTTAAAAGCCTCTGA10.6944444444444444No Hit
CAGTAAACAGAACAAACCAATACTCAGAAAAGGGAAAGTTGACGACAAAC10.6944444444444444No Hit
TATATCAACTGATAGGGAAAATTTTCAAGAAAAGATTGCATCAATACTGT10.6944444444444444No Hit
CGAATAGATTGCAGCACTTCTGGTACATCTGTTCATCCTCAAGAATTCCC10.6944444444444444No Hit
ATGCAGTTGCTGCCGGTTGATTTGAGTTTAATGTCCAATCATAAGTCTTG10.6944444444444444No Hit
ATATAGTACATATGATCCCCAGTAGGATACCATTGTCTTAATGCATCAAC10.6944444444444444No Hit
GCGGAGGGTGACTTAGGAAAGGGGCGCGCGGGGTGTTGAATTTGGGTCCG10.6944444444444444No Hit
GTCCCGCACTCGCGAGATACTCACGAAGACCACTGTGGACCATATGGCCA10.6944444444444444No Hit
GGACTTTATCTTGATTGATACAAGGATTCAACCATTTGACTGCAGCAATG10.6944444444444444No Hit
AAATCAGAGAGTATGTGTTAGCCTTACTGCCCCGTCAGCACCCATTGGGT10.6944444444444444No Hit
GAAAGGATGGCGGTGCATTTACTGCAGATCAAGATGAAGGCACATCTGTG10.6944444444444444No Hit
AGATAATTCAAGGAAGAGAGCCAATCATCGCCTCCACACACGTGAAAAGA10.6944444444444444No Hit
GAATGCACCAGTCTCTGTGTTTGTCGTCCACTTTCCCTTTTCTGAGTATT10.6944444444444444No Hit
GCCATAAGCACCACATTCCCTTATACTGGAGATCCTCCATACAGCCATGG10.6944444444444444No Hit
TCATACAGCTTACATGTGTAAAATAAGTTACAGAACAAGTACAAACAATT10.6944444444444444No Hit
ATTTATGAGACACCTACTAGATGTCAATGCTGTGTTAAATGCAAGAAATG10.6944444444444444No Hit
GTTGTGAGAAAGATGATGACTAATTCACAAGACACAGAGATTTCTTTCAC10.6944444444444444No Hit
ACCACATTAGCCTTCAATCCTTTTGCAACATTGATAATTTAATATAATCT10.6944444444444444No Hit
ACCTGAAGTACTTCAATGAATCAACAAAGAAGAAAATTGAGAAAATAAGG10.6944444444444444No Hit
CTTTAGATGTACAGTTAGAGCCTCCGAGAAGCCAGAAACACCTCTCTCCC10.6944444444444444No Hit
CCCAGAGGCTCCTGGGAGAGGCAGCAGCAGGCTGGGAGCACACCAGAGCC10.6944444444444444No Hit
GTCTGGAGTAAATGAATCAGCTGACAAGAGAATTGGAGTAACAGTGATAA10.6944444444444444No Hit
TGTTGGATGTATAGCCCAGTCCTAAGTTGTAAGCAGTGTTTTGACTGTTG10.6944444444444444No Hit
GCTCTATGTTGACAAAATGACCATCGTCAACATCCACAGCACTCTGCTGT10.6944444444444444No Hit
GTATTCCGATCATTCCCATCACATTTTCTCGGGATTCAATTAAGCAGTTC10.6944444444444444No Hit
GTAAGTAAGTATGCTAGATTCCAGGTTTGAGTTGATTAAAACAAAATAGT10.6944444444444444No Hit
CATCAAGGTACTGGGAATGAAAAAGTTCACTAATAGATCAAATAAAATAT10.6944444444444444No Hit
CCGAGTGGGATGCTGACCTGACTGCGCCACCCAGGCGGCCCTCCCTCCGT10.6944444444444444No Hit
GGGGGGGGGGGTTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10.6944444444444444No Hit
ATTCCGTGTCCTCGCTGGGGACATATCAGCCAGTGAGGCTCTGAAAAGAA10.6944444444444444No Hit
GCTTCATATAGCCCCCCAATATCGAAGGTTACAGGTTCCAGGTTGTCCCT10.6944444444444444No Hit
GGGAAGAAGGGGATCTGTGTCTGGAGCTAATAATGCTGTCATCCTCTCTC10.6944444444444444No Hit
ATCATATTCCATGCTTTTGGCTGGACCATGGGCTGGCATTACCACAGCAT10.6944444444444444No Hit
CCACTTGTGGTCTCGGGTCCCGCATTTCTGTCGGTTTGGCTGCTGGGTGT10.6944444444444444No Hit
ATGTAGCAAGATTCAAAACTGTTCGCCCTTTTTTTTTTTTTTTTAAAAAT10.6944444444444444No Hit
CCCCAAGAACCAGAACATTACTAATGCCATACATCTCCACCAAAGGTAAT10.6944444444444444No Hit
AAGCAGGGGAGTTACTGGAGCCAGGGCTGGGCTGGCCTGTGGAGCCCCCA10.6944444444444444No Hit
GAAAGAGACGTAATGCAGTGTGATCCGATTTGATCCTTACCTTTCCTCAG10.6944444444444444No Hit
CTAGATGTCAATGCTGTGTTAAATGCAAGAAATGTATGAAGAAAGGCAAT10.6944444444444444No Hit
GTCGAACATAACTTGATGATCTCAGAGCACTATTCTTTCTTGATACGTCC10.6944444444444444No Hit
AATATATTCAATATGGAGAGAATAAAAGAACTGAGAGATCTAATGTCGCA10.6944444444444444No Hit
GCGACAACCTCGAACCTGGAACCTTCGATCTTGGGTGGCTATATGAAGCA10.6944444444444444No Hit
ATTTTGCACAGTATGGATACCAAAAAGTAGCAATGCCGCAACTACTTCAG10.6944444444444444No Hit
CGAGGAAGAGCACGGGACTTTACAGCAGGTGAGACAGTAAGAGGTCACTC10.6944444444444444No Hit
GTGGCGGGGGGGGGGGGGGGGGGTGGCGGGGGGGGGGGGGGGGCGGCCGG10.6944444444444444No Hit
TGTCAATCCGACTCTACTTTTCCTAAAAATTCCAGCGCAAAATGACATAA10.6944444444444444No Hit
CCCCTGTGGCTTGTGTTGAGAATAGAACGATTCCTCTTGGGAATCCAGGA10.6944444444444444No Hit
ACACAGTAAACAGAACACACCAATACTCAGAAAAGGGAAAGTGGCCGACA10.6944444444444444No Hit
GTTTCCCCACAGATGGTCACAGTGCTGTTGTTTTTCAGGGGAGAAGACAT10.6944444444444444No Hit
GTATGGATAGCAAATAGTAGCATTGCCACAACTACTTCAGTGCATGTGTG10.6944444444444444No Hit
CTGCAGAGCTGCTCAAGGTTTACCCAAAGCTACAGAAGGAAATAATCTTC10.6944444444444444No Hit
CATGGGCCTCGACACTTGTCCTATCGCAGTCCTCAAGAGCATGTCTCCTA10.6944444444444444No Hit
GGGCAGCAGCAAAGGGGAGAAGGTTTATTATATGGACAGTCTCAAATGTC10.6944444444444444No Hit
GTAGAAACAATGCATTTTTTCATGAAGGACAAGTTAAATTCATTATTTTT10.6944444444444444No Hit
GGGGGGGGGGGGGGGGGGCGGCGGGGCGGGGGGGGGCGCGGGGGGGGGGG10.6944444444444444No Hit
CAGGAAGTGTGGAGGATGAGCATGCCCTCATCCAACAGTACTGTCAGACG10.6944444444444444No Hit
GTAGAAACAAGGTACTTTTTTGGACAGTATGGATATCAAATAGTAGCATT10.6944444444444444No Hit
TTTTATAGCTTCTTATTTTAATGTTTACAGGTCCCCAGATGCTGAGATTT10.6944444444444444No Hit
AAAGTAGCCTATGATGATCTCATAGAGCGTCTCCTTCAGCTGTCGGTGAG10.6944444444444444No Hit
CATTTGGTCGCTGTCTGGCTGTCAGTAAGTATGCTAGAGTCCCGGTTTCT10.6944444444444444No Hit
GCAGGGAAGGGGAGGAGCGAACTGTCAAGAGGGTGCGCGGGCCGGAAGAA10.6944444444444444No Hit
CGGAAAAGGCTATGAAAGAATATGGGGAAGATCCGAAAATCGAAACTAAC10.6944444444444444No Hit
GGAAAATTGTTAAAAACGAAAGATCCTGGCCAGTTTACTGCAGAGACAAT10.6944444444444444No Hit
GGGGAGAGAGGAAGAAGCAAGCTCCCCACTGAGCAGGGAGCCCAATGCAG10.6944444444444444No Hit
CGCAAAATGCCATAAGCACCACATTCCCTTATACTGGAGATCCTCCATAC10.6944444444444444No Hit
GGCCGCGCGTCTGCCGGCTTGGTGGGGCCGCGGGGGGTGAGGGGTGTGCG10.6944444444444444No Hit
GCTCTTCCGTGCGGCCTTCGTTGTTTCCCCGTCTGGTGTGAGCTTAACCC10.6944444444444444No Hit
TGTACACACTCAAACACAGACCTGAACACACACAAATCCACAGACCCACA10.6944444444444444No Hit
GCTTAAGGAACCCTAAAGAGAAGAACCTCCACATGTCCAAGAATTGACAC10.6944444444444444No Hit
TATTGCCAGAAAGACAAAGTACCCATAAGGACGGCTAGAGAAGTCACGAG10.6944444444444444No Hit
CAAGTTGTGGAGACGCATATAGACTGTTGAATACAGATTTTGCCAGTAAG10.6944444444444444No Hit
ATCTTGATGAACCCACAAAAACATATGCATATGCATTCTGATAGAGACAT10.6944444444444444No Hit
GCCCTGGGCTCATGCCTCAGTTGGAGTCAGCCTTCCTTGGCTCCCCCGCG10.6944444444444444No Hit
GGTTCATGCTCATGCCTAGGCAAAAGATAATAGGCGCTCTTTGCGTGCGA10.6944444444444444No Hit
GCCACAGTCCATGGTTTGGCTGCCTGTTTTACATCGAGTGGCAGCGGCCG10.6944444444444444No Hit
TCTCAGGACAGCAGACTCCACCCCAGATGTGCCTTCATCTGGATCTTCAG10.6944444444444444No Hit
GCTCACCAACACAACACCAAAAAAACACACTACTTTTCTCTAAGCAATTA10.6944444444444444No Hit
GGTTTCATCCATTCTGGTCTATCCCGTGGAATCCAATTTAGTCAGTAAAG10.6944444444444444No Hit
AGTAGAAACAAGGCATTTTTTCATGAAGGACAAGTTAAATTCATTATTTT10.6944444444444444No Hit
GCCATGGAACAGGAACAGGATACACCATGGACATTCGAGAAATTTTTCCC10.6944444444444444No Hit
GAGACTGGTGCACACCAGCTCCACCCGATTGATGGACCACTACCTGAGTA10.6944444444444444No Hit
CACCCATTAGCTGTTAGGCCATTCGATCTAAAGACTTCTATCGAGTTCGC10.6944444444444444No Hit
GTCTTATGAGTTGGGTAATTATGGGGGCAGGGGTGAAGGCGCAAGGTTTG10.6944444444444444No Hit
GGCTATGGCTTTCGGTAAACACTGCCACCATGGATTATTTTTGAATTCAT10.6944444444444444No Hit
CCCTATGTCTCTTGGTTAAGGTGGGGCTTCTTCAATGTCCAGCCCTAACT10.6944444444444444No Hit
CACTTTGTCAGTCATAAAGAGATTTATTATTTAAAAAATTCTTTTGTAAT10.6944444444444444No Hit
CTTATATTCACAACACAAGACAAAGGCGAAATCTTGATGATTAACACAAA10.6944444444444444No Hit
GAGTAAGGTGCCCGAGCGCAGGAGGGCGTCCGGGGCCAGCACAGCTCGGA10.6944444444444444No Hit
ATTCCAGGTGCTTTGGGCTGTGAGTCAGGGTCTATTTCAGGACAGTGAGT10.6944444444444444No Hit
AGGCTATGGCTCGCTGAGGATTCGAAAAAACTGTCCTCCGAGGCGACCTC10.6944444444444444No Hit
GTGGGAAGCCGGGCCAACAAATCGGTTATGTAAGTGGGCCCGCTGCAAAC10.6944444444444444No Hit
GTTTATATGTCGATAAATATGTGTGTATGTGTATGAATAAGTAAAGGAGC10.6944444444444444No Hit
GAAGAACAGTAACAGTTGTCCACAGCACAGACGAGAATCTTGCGGCCGCC10.6944444444444444No Hit
ATCGAAAGCATGTCAAATATATTCAATATGTAGAGAATAAAAGAACTGAT10.6944444444444444No Hit
GCTTGGGTGTTTGCATATCCTGAACTGCCGGGTGTTGTCCCAATTTCAAA10.6944444444444444No Hit
AATTAGAACATTAGCCTTCTCTCATTTTGCAAGATTTATCAGTTAATTGA10.6944444444444444No Hit
GATCTTCATGATCTCAGAGAACTCTTATTTCTTGATACTTCCACACTCGA10.6944444444444444No Hit
CCTATATGAACTGCTAGGGAAAAATTTCTCGAATAGATTGCAGCACTTCT10.6944444444444444No Hit
ATGTCTCTTGGTTAAGGTGGGGCTTCTTCAATGTCCAGCCCTACCTCTTG10.6944444444444444No Hit
TTCCCCAACTCCTGCCACGCTGAGACCTGTATACGTGCAGACCTACGGGC10.6944444444444444No Hit
CAGACAGACCGACCCTCGGACAGCAGAGAGAAATCCAGGTCTGGATCCTG10.6944444444444444No Hit
TTATGCTAGAGTACAGGTTTCGTTTAATTTCAAACAATACGTCCCCTTTA10.6944444444444444No Hit
CAAGAGAATAGGATTTCTCATTTTGGGCAAAGAAGACAAGAGATAAGCAT10.6944444444444444No Hit
GCCCTGAAGTACTTCAATGAATCAACAAAGAAGAAAATTGAGAAAATAAG10.6944444444444444No Hit
GGAAGAGGGTGTGGGAGGGTGGCTGGGAGAGGGCCCCGCACCTCTGGGTT10.6944444444444444No Hit
ATATATCACCAGAAATCAACCCGAGTGGTTCATAAACATCCTGAGCATGG10.6944444444444444No Hit
GGCATTACCACAGCATTGTATAAAGAATCAATCTCTTAATGACTGACAAA10.6944444444444444No Hit
GCAAATAGCATCCCTATTCTGTCCAAAAATAAGAATGACACACTATGTTT10.6944444444444444No Hit
GTTCCAGCACCTGCACCTGCTCCAGCACCTGTCCCTGCTCCTGCACCTGA10.6944444444444444No Hit
CCCATGATGGGCGTGTGCTCGTGCAGCGGGAAGTCCCTCCACTCGAGGGT10.6944444444444444No Hit
GGTGGAGCCCATCCCCCATGCCCGCACGGTGTGCCCGGGGCTCCGCTTTC10.6944444444444444No Hit
TGTCCACAGAACAGACGAGAATCTTGCGGCCGCCATACTGGGGGAGCATG10.6944444444444444No Hit
GTGTCAAAACCAACCTAACACATTCTGCTGCGCTCTTTATTCTGTAGAGA10.6944444444444444No Hit
CACACACACACACACACCATAGCGCACATATTAGCGGGCCATCTCAACTT10.6944444444444444No Hit
GAATGGATGGGATGATGGAAATGAGAGGGAAAGGATGACGTGGAAGTGAC10.6944444444444444No Hit
CCCCAGATGTGCCTTCATCTTGATCTTCAGTCAAAGCACCTGCATCCTTT10.6944444444444444No Hit
TGTATATACAGCTCGCTGAAGAGGTCCATGACCTCAAAAAAAGATCAAAT10.6944444444444444No Hit
ATTGTTTACAGAATCAATCTCTTTATGACTGACAAAGGGATTCAGGGGAT10.6944444444444444No Hit
AACATGTACCCATTCCCTAGTCTTGCCATTTTGTTTGAGAGCATTATTGG10.6944444444444444No Hit
GCTCTATTGGGAAAGTGTGCAGGCCCTTACTGGCAAAATCTGTATTCAAC10.6944444444444444No Hit
GAGGCAAGGCGCTGACGCCGTCAGCACAGCAGAGGTCGTCATCCTATTGC10.6944444444444444No Hit
GAGAAAGGCCAGCATAGTTTCCTTATTGAAGAGAGGGAAAGAGAATGAAA10.6944444444444444No Hit
TACTCACTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACA10.6944444444444444No Hit
TTTTTCGACAGTAAGGATAGCAAATTCAAGCATTTCCAGAACTACTTGAC10.6944444444444444No Hit
GACTGGTGCACACCCGCTCAACCCGATTTATGCACCACTACCTGAGGATA10.6944444444444444No Hit
GAATAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGCACTCGCGAGATA10.6944444444444444No Hit
GACAAGTCTTCTTTGCCAAAAATGATAAATCCTCTCAGGACAGACTCCAC10.6944444444444444No Hit
CTCCTTCCGTAGAAGTCCCTCTTTTCAAACCGTATTTAAATCTACTATAA10.6944444444444444No Hit
CCCGTTTTCGTTTCAATACCATCACTACGTCCCCTTGCCCAATTAGCACA10.6944444444444444No Hit
AAACAATTTAGTTTTTAAACAATTCGACACTAATTGATGGCCATCCGAAT10.6944444444444444No Hit
CGTACGTTCTTTCTATCATCACGTCAGGCCCCATCAAAGCCGAGATCGCG10.6944444444444444No Hit
ATACTACATAAGCCGACACAGACAATAGATGAACCAGTAAGTATGCCTGT10.6944444444444444No Hit
ATGCAGTGTGATCCGATTTGATCCTTACCTTTCCTCAGCTGGATTTCTGT10.6944444444444444No Hit
GGTTTCTCCCTTAGATCATAAACACCCTTTGTGTTTATTCCTACCTTGCT10.6944444444444444No Hit
ATATGTATGTATGTGTGTGTGTGTGTGTGTCTGCTAAATACCTAGAGATG10.6944444444444444No Hit
GTCCTCTTCTAAAATCCAGCAAATTCCAAATTCCAAGACGCATCTGGCCC10.6944444444444444No Hit
CACTTGGGATTGCCAGCTACTGGCCACTTCCCAAGCAGCTCATGCACTCC10.6944444444444444No Hit
ATACTGGAGATCCTCCATACAGCCATGGAACAGGAACAGGATACACCATG10.6944444444444444No Hit
GTGGTGGTTAGTGCACACTCACTAGATAAAACATCTCAGAGCAGTACAAC10.6944444444444444No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGGGG10.6944444444444444No Hit
GATCCCAAAATGTTATACAACAAAATGGAAATTGCACCATTTAATTCTCT10.6944444444444444No Hit
GTGTTGCAATATGTTCGATTCTGTAATGGGTGTGAACAACAATCAGCTGA10.6944444444444444No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers