FastQCFastQC Report
Fri 2 Oct 2020
HTGTLBGXG_n02_S2_R1_H07_FD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHTGTLBGXG_n02_S2_R1_H07_FD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1589
Sequences flagged as poor quality0
Sequence length151
%GC48

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGCAACACCGCTCATGGATTATTCATGACACTAGCCAGACTCCGAGCTC120.7551919446192574No Hit
GTACAGGAATGAGGAATGGATGCTGGAATATTTGTCTCCCCCTCCTCTGC70.4405286343612335No Hit
ATCTATCCCTGTCTCTCTCTTTGTCTCTCACACTCTCTGTCTGTCTCACA70.4405286343612335No Hit
GAAAGCAGGAGTCCAAAGAACATCGCTTTTCAGTGACGTTGTCAGGGGAG60.3775959723096287No Hit
AACTGGATCAGGTGCAGGAATAGGAGCAAGAACAGGAGCAGGTGCAGAAG50.3146633102580239No Hit
GTCCAAAGAACATCGCTTTTCAGTGACGTTGTCAGGGGAGAAGGGGGAGA50.3146633102580239No Hit
GAGGAACACCGTAAAGACCAAGGAGCTACTCTTAGGAACTCTGGCAGAAG50.3146633102580239No Hit
CTGTAACACTGTGGTGGTTTCCACAGCAACGGCCCAGAGACAGAGGGTGA50.3146633102580239No Hit
ATTCATGACACTAGCCAGACTCCGAGCTCAACCAGAGGGCACAAACAATT50.3146633102580239No Hit
CTCATGGATTATTCATGACACTAGCCAGACTCCGAGCTCAACCAGAGGGC40.25173064820641916No Hit
GTGATACCTAGTCCGGTTCCTGCAGTCCCAAAGGAGAAAACCAAGTGATG40.25173064820641916No Hit
TATCTATCCCTGTCTCTCTCTTTGTCTCTCACACTCTCTGTCTGTCTCAC40.25173064820641916No Hit
CATTCAATATCACCTTGTCCACAAAGGACAATAAACTTTGGTTTGAAAGT40.25173064820641916No Hit
CACACACACACACCGTAGAGATGCTGGCGAAAGCAGTCAAGCGAAGTTGT40.25173064820641916No Hit
GTCTCTCTCTTTGTCTCTCACACTCTCTGTCTGTCTCACACACTCTGTCT40.25173064820641916No Hit
ATATAAAATATTTTCCAGTAATAAAATGCAACACCGCTCATGGATTATTC40.25173064820641916No Hit
AATTAAGGCTTAGATGAATTGCCCAGCATCACAGAACCTCTTGATGTGTG40.25173064820641916No Hit
GATGTGAGCCTTGATTCAGAAGTAAAACAGACTCCGCAGTGGTTTAGACT40.25173064820641916No Hit
GTAATAAAATGCAACACCGCTCATGGATTATTCATGACACTAGCCAGACT40.25173064820641916No Hit
AATTAACATATAAAATATTTTCCAGTAATAAAATGCAACACCGCTCATGG40.25173064820641916No Hit
GTAACACTGTGGTGGTTTCCACAGCAACGGCCCAGAGACAGAGGGTGAGA40.25173064820641916No Hit
AGAGAGAGAGACAGGAAGAGTGAGCTCTCTTTGACACAGCCACTGACATG30.18879798615481436No Hit
CTTAAAGGCAGAGCCTAACGCCTAAAGCTACCAGTTACTGAAAAAGTGTA30.18879798615481436No Hit
GAGAAAGAGAGAGGGAAAGGAGGGGTTCGAGGGAACAGACAGCTCATTTC30.18879798615481436No Hit
ATTTTACTCTGTACTTGACTTAGAATGGAAGGAAATAAAACAAAAAGCAT30.18879798615481436No Hit
GGAAAGGAGGGGTTCGAGGGAACAGACAGCTCATTTCTATAGGAGACTGT30.18879798615481436No Hit
GAACACACTGCGTGGAATTACTTAATGATGAATGCTCACTTTCAGAAATC30.18879798615481436No Hit
CCAAAGAACATCGCTTTTCAGTGACGTTGTCAGGGGAGAAGGGGGAGAAG30.18879798615481436No Hit
ATGTGGGACTCCATTCCAGGACCCTGGGGTCATGACTCGAGCCAAAGGCA30.18879798615481436No Hit
ATATTTTCCAGTAATAAAATGCAACACCGCTCATGGATTATTCATGACAC30.18879798615481436No Hit
GTTGGGAACCATCTGTCAGATCATCCAGCAAAACACGCTGACATCCTTCA30.18879798615481436No Hit
GTTAATGAGTTTTTAAAAAGCCTTCCAAAGTGATTATAAGATCCTTTTTT30.18879798615481436No Hit
GCAGTAACCCCTGCTCGAAATGCCCCACTTTCTCCTCGCACACGTATGAA30.18879798615481436No Hit
AGGCAAAGCAGTCTGGGAAGTGATAGTCCCCGTCCACGTTTTCTGTAGGA30.18879798615481436No Hit
TTCCTCCCCCTTTGCTGAAGTGACCATGGAAATAGCAACACGTCCAAGAT30.18879798615481436No Hit
GAGTGGGGGGCTGCCCCCGGTCAGAAAGCCACCTGGCGCAGAGACAGCCT30.18879798615481436No Hit
ACTTAATGATGAATGCTCACTTTCAGAAATCTGAGCAAGCTGGAGGCAAG30.18879798615481436No Hit
AAATAACATTGACCTTAGGGGGATAAAGGACAGGATGCACAGAAAACTCT30.18879798615481436No Hit
TCACAGAACCTCTTGATGTGTGTGCCGTGGTTTATGATTTCTGTGCTGTT30.18879798615481436No Hit
TTGCTGAAGTGACCATGGAAATAGCAACACGTCCAAGATATACCTGAATT30.18879798615481436No Hit
CACACACACACCGTAGAGATGCTGGCGAAAGCAGTCAAGCGAAGTTGTCA30.18879798615481436No Hit
CTATTTGACAGATTCAGGGTAATGTCCTCTTAAGAAAATAAAATTCTTCA30.18879798615481436No Hit
CACACACACCGTAGAGATGCTGGCGAAAGCAGTCAAGCGAAGTTGTCAAA30.18879798615481436No Hit
GTGTTGGGGGATCCCATGCTTTTTGTTTTATTTCCTTCCATTCTAAGTCA30.18879798615481436No Hit
CCTTAGGGGGATAAAGGACAGGATGCACAGAAAACTCTTAAAGGCAGAGC30.18879798615481436No Hit
GATGAGAACAGGTGCAGGAACAGGTGTGGGTGCAGGAGCAGGTGCAGGAG30.18879798615481436No Hit
GTTGTTGGTAATGGCTTAATTAACATATAAAATATTTTCCAGTAATAAAA30.18879798615481436No Hit
GCAGGGAGGGGTGATCAAACCATGTTGTTGGTAATGGCTTAATTAACATA30.18879798615481436No Hit
GTTAATACACTACTAATAAACAAGACAAGCAGTTGGGATACTCCTCAATC30.18879798615481436No Hit
GACAGAGGGTGAGAATGTGCTGTGGCAGTGACCTTGTACAAACACACACA30.18879798615481436No Hit
GATCAAACCATGTTGTTGGTAATGGCTTAATTAACATATAAAATATTTTC30.18879798615481436No Hit
GGGTGAGACCCACCGTGGTGGGGATGCAATTCCTCCCCCTTTGCTGAAGT30.18879798615481436No Hit
CTGCAATAGAGGTCTAATGGAGGGGTCCCAGTGAAACATTGTTTCTATTG20.12586532410320958No Hit
CACATACACACACACACACACACACACACCGTAGAGATGCTGGCGAAAGA20.12586532410320958No Hit
GAGCAGAGGAGAGCCTGGAGATTTTTAGCTCTGGAAGATTCCACACACAG20.12586532410320958No Hit
GAAAGCAGGAGCATCAGACAGGCAGCATAGGAAGGGCATTTACCCCCTTC20.12586532410320958No Hit
AAAGCAGGGAGAGGAAGCTCTCTTTGACACAGCCACTTACATGCACAAGA20.12586532410320958No Hit
GTCTCACACACTCTGTCTCTCACTCTCTGTCTGTCTCTCTCTCTCTGTCT20.12586532410320958No Hit
GGGTGAGAATGTGCTGTGGCAGTGACCTTGTACAAACACACACATACACG20.12586532410320958No Hit
AGGGAGGGGTGATCAAACCATGTTGTTGGTAATGGCTTAATTAACATATA20.12586532410320958No Hit
ATGCAGGACTTGATCCCAGGTGTCCTGTAGGCAGATTCTTGAAAATGTTT20.12586532410320958No Hit
GTCACGGGAACAGGTGTGGGAGCAAGTGTGGCCGCAGAGGATGGGAGCAG20.12586532410320958No Hit
ACATTGACCTTAGGGGGATAAAGGACAGGATGCACAGAAAACTCTTAAAG20.12586532410320958No Hit
AATGTGGACTCTGGGATGGTACTTCTCAGTTGTAACTTTCACACAGCAGG20.12586532410320958No Hit
TTGCTGCTCTCTGTCATTGATGCGGTAACGGTCATAAAAAGACGTATCAA20.12586532410320958No Hit
TTATAATCTTCGCCAGGGACTTCAGAAGCCTGTGTCACGTAGTAATTTGT20.12586532410320958No Hit
GGGAGGGGTGATCAAACCATGTTGTTGGTAATGGCTTAATTAACATATAA20.12586532410320958No Hit
CACACATACACGCACACACATACACATGCACACACACATACACACACACA20.12586532410320958No Hit
CTGCTGGCAAGGGTGCCCGACACACACAGAGGCCCTCTGACTTAAGAGTC20.12586532410320958No Hit
ATCATAAACCACGGCACACACATCAAGAGGTTCTGTGATGCTGGGCAATT20.12586532410320958No Hit
CTCATTGACACAGCCACTTACATGCACAAGAGAGAGAGACATGGAGAGTG20.12586532410320958No Hit
GTCTCTCACACTCTCTGTCTGTCTCACACACTCTGTCTCTCACTCTCTGT20.12586532410320958No Hit
CTCCCTGTCTCTCTCTTGCATGTCAGTGGCTGTGTCAATGAGAGCTCACT20.12586532410320958No Hit
GAGTAAAATGTGGACTCTGGGATGGTACTTCTCAGTTGTAACTTTCACAC20.12586532410320958No Hit
CTGATGGACCCTATTTGACAGATTCAGGGTAATGTCCTCTTAAGAAAATA20.12586532410320958No Hit
CATTACCACCTTGGCACATCTTGTGGTTTCCACGCGGTCTTTCCTTCGAC20.12586532410320958No Hit
GCCGAGGGGTGTTTGCCAGTTTGAGGACTTGGAGATCCAACATCCAGTGT20.12586532410320958No Hit
CTTCTGAAGTCCCTGGCGAAGATTATAAAGTCTGTGTGTGGAATCTTCCA20.12586532410320958No Hit
CACACACTCTGTCTCTCACTCTCTGTCTGTCTCTCTCTCTCTGTCTGTCT20.12586532410320958No Hit
GGTATATCTTGGACGTGTTGCTATTTCCATGGTCACTTCAGCAAAGGGGG20.12586532410320958No Hit
CTCGGATACTGCCCGCTGCCACTGCTCCTGCTCCTGCTGCTGCTCCTGCT20.12586532410320958No Hit
GCTGTACACAGAAAAGCAAATTAGAGAAACAGGATGTAAAGCACAATTCT20.12586532410320958No Hit
TATAATCACTTTGGAAGGCTTTTTAAAAACTCATTAACAGCTTGGGGTGG20.12586532410320958No Hit
GGGTAATGTCCTCTTAAGAAAATAAAATTCTTCAATCAGAACATGTTGGG20.12586532410320958No Hit
CATTTGACAGATTGGGACTTAGAGGTTTAGAAATATTAAATAGCTTGCCA20.12586532410320958No Hit
CTTTTTCAGTAACTGGTAGCTTTAGGCGTTAGGCTCTGCCTTTAAGAGTT20.12586532410320958No Hit
CACTGGATGTTGGATCTCCAAGTCCTCAAACTGGCAAACACCCCTCGGCA20.12586532410320958No Hit
CTTCAGCAAAGGGGGAGGAATTGCATCCCCACCACGGTGGGTCTCACCCT20.12586532410320958No Hit
CATCAAGAGGTTCTGTGATGCTGGGCAATTCATCTAAGCCTTAATTTGCT20.12586532410320958No Hit
CTCTGTGTGTGTCGGGCACCCTTGCCAGCAGAGCAGCCAGCCCCTAACGA20.12586532410320958No Hit
ATAGTAGCGTGTGTGTGTGTGTGTCTGTGTGTCAGTTATCAGATTATGCG20.12586532410320958No Hit
ATGCAATTCCTCCCCCTTTGCTGAAGTGACCATGGAAATAGCAACACGTC20.12586532410320958No Hit
GACTGTTGGTTTTCTTTTGAACGCTGTACACAGAAAAGCAAATTAGAGAA20.12586532410320958No Hit
GACAGATTCAGGGTAATGTCCTCTTAAGAAAATAAAATTCTTCAATCAGA20.12586532410320958No Hit
AGACACAGGGTGACAGTTGTTGTTGATACGTCTTTTTATGACCGTTACCG20.12586532410320958No Hit
CTGTTTTACTTCTGAATCAAGGCTCACATCTTCTCATTCTTATTTGTCCT20.12586532410320958No Hit
CTATAGGAGACTGTAAGCCGCAGCTGAATCTGGGCTCCTCTGTGTGAGGC20.12586532410320958No Hit
TCATAAACCACGGCACACACATCAAGAGGTTCTGTGATGCTGGGCAATTC20.12586532410320958No Hit
GGATGCAGGACTCGATCCCAGGCCCCAGGATCCTGACCTGAGCCAGAGGC20.12586532410320958No Hit
TTCCACAGCAACGGCCCAGAGACAGAGGGTGAGAATGTGCTGTGGCAGTG20.12586532410320958No Hit
CACAATTTATTGAGGAATTTGCAGTGGTTCTTTTTGGTTTGTTTGTTTTG20.12586532410320958No Hit
CATATAAAATATTTTCCAGTAATAAAATGCAACACCGCTCATGGATTATT20.12586532410320958No Hit
CTGTGATGCTGGGCAATTCATCTAAGCCTTAATTTGCTCACATGAGAAGA20.12586532410320958No Hit
GGCTTAATTAACATATAAAATATTTTCCAGTAATAAAATGCAACACCGCT20.12586532410320958No Hit
GAGACAGAGGGTGAGAATGTGCTGTGGCAGTGACCTTGTACAAACACACA20.12586532410320958No Hit
GTCTAAACCACTGCGGAGTCTGTTTTACTTCTGAATCAAGGCTCACATCT20.12586532410320958No Hit
CTGTCAGATCATCCAGCAAAACACGCTGACATCCTTCAGGATGAAAGGCT20.12586532410320958No Hit
TCAGAAGCCTGTGTCACGTAGTAATTTGTAATTTTGCTGAGCAATGCCTT20.12586532410320958No Hit
GAGAGAGAGAGAGCAGGAGGGAGAGAGAGCGGGTGGGCGAGAGAAGTAAA20.12586532410320958No Hit
CTGCAGGAACCGGACTAGGTATCACATTCCAGCCAAAAGCCACCCCAAGC20.12586532410320958No Hit
TTTAAAAAGCCTTCCAAAGTGATTATAAGATCCTTTTTTTTTTTTTTTTT20.12586532410320958No Hit
CTCTCTTTGTCTCTCACACTCTCTGTCTGTCTCACACACTCTGTCTCTCA20.12586532410320958No Hit
GTGTGAGGCGGTAAGATGGAGTGGGGACTGCTATCAGGCAGTAATGTGAC20.12586532410320958No Hit
TGTTATTTCTACCCTCATTTGACAGATTGGGACTTAGAGGTTTAGAAATA20.12586532410320958No Hit
GGTTTAGACTCTTAAGTCAGAGGGCCTCTGTGTGTGTCGGGCACCCTTGC20.12586532410320958No Hit
GTGGGGGGCTGCCCCCGGTCAGAAAGCCACCTGGCGCAGAGACAGCCTCC20.12586532410320958No Hit
GCTCTACAAGCTTGAGTCAGACAAGCGCCTGGTGGAGGAGAAGGTGAGCC20.12586532410320958No Hit
ATCTTCGCCAGGGACTTCAGAAGCCTGTGTCACGTAGTAATTTGTAATTT20.12586532410320958No Hit
GCTGCAGGGAGCCCAGCAGCTTCTTGGCCTCCTGCATGCGCTCCCCGAGG20.12586532410320958No Hit
GTGCAGGAACTGGATCAGGTGCAGGAATAGGAGCAAGAACAGGAGCAGGT20.12586532410320958No Hit
TTCTAAGTCAAGTACAGAGTAAAATGTGGACTCTGGGATGGTACTTCTCA20.12586532410320958No Hit
CAGTGAAGCTTCTGCAGTCCGCATTCCATACCCGGGTGAAGAGGGATGTA20.12586532410320958No Hit
GTGTGTGTCTGTGTGTCAGTTATCAGATTATGCGTCTGTGTGTGTGTGTT20.12586532410320958No Hit
GTGTGTAGGTCTGCTTTTAGATGGGAAGGGAGATACTGCCCATCTGGTAT20.12586532410320958No Hit
TCTTAGGGGGAGAAAGGCTGCTGCCCGTGCAGGTCTGGGTCCTGTCCATC20.12586532410320958No Hit
CACACACTCACACACATAAGCACACACACTCACACTTAAGATGTCAGAAA20.12586532410320958No Hit
GCAGGGAGAGAGGCAAAGGGGGAGGAGGAGGGAGAGGGAGAGAATCTCAG20.12586532410320958No Hit
TTTCTATAGGAGACTGTAAGCCGCAGCTGAATCTGGGCTCCTCTGTGTGA20.12586532410320958No Hit
GTCAATGAGAGCTCCCTCTCCCTGTCTCTCTCTTGCATGTCAGTGGCTGT20.12586532410320958No Hit
GAATATAGTCAATGGTACTATAATAGCCTTGTGTGGTGACAAATGGTAGC20.12586532410320958No Hit
CTGTAAGCCGCAGCTGAATCTGGGCTCCTCTGTGTGAGGCGGTAAGATGG20.12586532410320958No Hit
CAGAAGAGCCTCTCCACGCTTAGGATTCAAGGCATTGCTCAGCAAAATTA20.12586532410320958No Hit
GCAGGAAGGGCACCGGTGTGCTGAAGGGGCCTTCTAGCATCTTCCGCAGC20.12586532410320958No Hit
CATATCTATCCCTGTCTCTCTCTTTGTCTCTCACACTCTCTGTCTGTCTC20.12586532410320958No Hit
GTATCCCAACTGCTTGTCTTGTTTATTAGTAGTGTATTAACTGAGAATGG20.12586532410320958No Hit
GACTTAAGAGTCTAAACCACTGCGGAGTCTGTTTTACTTCTGAATCAAGG20.12586532410320958No Hit
GTTTTCTCCTTTGGGACTGCAGGAACCGGACTAGGTATCACATTCCAGCC20.12586532410320958No Hit
GTTGGTAATGGCTTAATTAACATATAAAATATTTTCCAGTAATAAAATGC20.12586532410320958No Hit
GAGTAGGAGTGACGTGGAAGCAGGCATCGGAGCAGGTGCAGGAGGTGGGA20.12586532410320958No Hit
GCAGTAGACACAGGGTGACAGTTGTTGTTGATACGTCTTTTTATGACCGT20.12586532410320958No Hit
CTGGTATTCATTGCGTAACTCAATTGGCCTTTTTGTGTTTTTCATTTCCA20.12586532410320958No Hit
GGAACAGACAGCTCATTTCTATAGGAGACTGTAAGCCGCAGCTGAATCTG20.12586532410320958No Hit
AAAGAACATCGCTTTTCAGTGACGTTGTCAGGGGAGAAGGGGGAGAAGCT20.12586532410320958No Hit
GAACATCGCTTTTCAGTGACGTTGTCAGGGGAGAAGGGGGAGAAGCTCGG20.12586532410320958No Hit
CTTCTCATGTGAGCAAATTAAGGCTTAGATGAATTGCCCAGCATCACAGA20.12586532410320958No Hit
AGTATTGGTTCACCTTTGAGGTCATCAGTGTGGGTGGTTCTGAGATGTCC20.12586532410320958No Hit
CCACAGCAACGGCCCAGAGACAGAGGGTGAGAATGTGCTGTGGCAGTGAC20.12586532410320958No Hit
ATTTGACAGATTCAGGGTAATGTCCTCTTAAGAAAATAAAATTCTTCAAT20.12586532410320958No Hit
CACACATACACACACACACACACACACACACCGTAGAGATGCTGGCGAAA20.12586532410320958No Hit
GTACTTGACTTAGAATGGAAGGAAATAAAACAAAAAGCATGGGATCCCCC20.12586532410320958No Hit
CTTTATAATCTTCGCCAGGGACTTCAGAAGCCTGTGTCACGTAGTAATTT20.12586532410320958No Hit
CACTCACACACATAAGCACACACACTCACACTTAAGATGTCAGAAATGGC20.12586532410320958No Hit
TTATTCATGACACTAGCCAGACTCCGAGCTCAACCAGAGGGCACAAACAA20.12586532410320958No Hit
GGATTATTCATGACACTAGCCAGACTCCGAGCTCAACCAGAGGGCACAAA20.12586532410320958No Hit
GACAGAGAGTGAGAGACAGACAGGAAGTGAGAGACAGACAGTGAGAGACA20.12586532410320958No Hit
ACAGAAAACGTGGACGGGGACTATCACTTCCCAGACTGCTTTGCCTTCTC20.12586532410320958No Hit
CAATTGCAGCTGACTGTTGGTTTTCTTTTGAACGCTGTACACAGAAAAGC20.12586532410320958No Hit
TCTTTGTGGCTCTTGCCATCTGTAACACTGTGGTGGTTTCCACAGCAACG20.12586532410320958No Hit
CAACCAGAGGGCACAAACAATTATGCCTCACTGAGTAATAGTAGCGTGTG20.12586532410320958No Hit
GCTTGGGGTGGCTTTTGGCTGGAATGTGATACCTAGTCCGGTTCCTGCAG20.12586532410320958No Hit
GTAGAGATGCTGGCGAAAGCAGTCAAGCGAAGTTGTCAAAGCTCAAGTTG20.12586532410320958No Hit
GGTGCAGGAATAGGAGCAAGAACAGGAGCAGGTGCAGAAGCAGGTGCAGG20.12586532410320958No Hit
TCATTTGACAGATTGGGACTTAGAGGTTTAGAAATATTAAATAGCTTGCC20.12586532410320958No Hit
CACATCAAGAGGTTCTGTGATGCTGGGCAATTCATCTAAGCCTTAATTTG20.12586532410320958No Hit
CGCTTAGGATTCAAGGCATTGCTCAGCAAAATTACAAATTACTACGTGAC20.12586532410320958No Hit
GAGAAGATGTGAGCCTTGATTCAGAAGTAAAACAGACTCCGCAGTGGTTT20.12586532410320958No Hit
CCTTTGGGACTGCAGGAACCGGACTAGGTATCACATTCCAGCCAAAAGCC20.12586532410320958No Hit
GACAGGAAGTGAGAGACAGGGAGTGAGAGACAGAGAGTGTGAGACAGACA20.12586532410320958No Hit
GTGTGTTTCACAGAGGGGAGGAGACTATGCGGAAAGGGAACTGACTGGTG20.12586532410320958No Hit
ATCTTGGACGTGTTGCTATTTCCATGGTCACTTCAGCAAAGGGGGAGGAA20.12586532410320958No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)