FastQCFastQC Report
Fri 2 Oct 2020
HTGTLBGXG_n02_S2_R1_H06_FD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHTGTLBGXG_n02_S2_R1_H06_FD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6
Sequences flagged as poor quality0
Sequence length151
%GC37

[OK]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATAAAGTAATGTTAAAATTCTCCATTTAAGGGGCGGTAACTAATCCAAA116.666666666666664No Hit
ATTGTTGTTTGCTTGACAATGTTGTTGGTCATTTTGTGTATTAGTCTCCT116.666666666666664No Hit
AACTTGCAGGTCCTGTAGAATCTGTCCACTCCTGCTTGTATTCCCTCATG116.666666666666664No Hit
GTCTAATGATGTCCACCATCCTTACTCCTCCAATCTGTGTGCTGTGGCAC116.666666666666664No Hit
TAAATTAAGTAATTGGAATTTTAACCTTACACATTATTATTCTTTATGTA116.666666666666664No Hit
ACAAGATACCATCTTCACTCTGGACTACAGAACTCAAGTAAAAATAACGA116.666666666666664No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)