FastQCFastQC Report
Fri 2 Oct 2020
HTGTLBGXG_n02_S2_R1_E09_FD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHTGTLBGXG_n02_S2_R1_E09_FD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences132
Sequences flagged as poor quality0
Sequence length151
%GC46

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAATAATAATATAACTGAAATAAAATACTATTCCTATAGCTTAAGCTAGT10.7575757575757576No Hit
AATAAAGGAACTATCCGCAAAAATTCCACCCCAAGTAAAACAACACACAA10.7575757575757576No Hit
GAAATAAGGAAAATATAAATATACACCCGAGCATCACGGGCTGGTGCTGT10.7575757575757576No Hit
CGTCAGGCCCCCTCAAAGCCGAGCTCGCGCAGAGACTGGAAAGTGTCTTT10.7575757575757576No Hit
ATTGGTGAAGTTCCCTCTCCATACAACTCAAGATTTGAGTCAGTCGCTTG10.7575757575757576No Hit
ACTTACAGTTCTTGGAAAGGATGCAGGTGCATTGACTGAAGATCCAGATG10.7575757575757576No Hit
TTTCTCATGTGGTTTGAATATGTTAGGCACATTCCAGACAAAGAATGTCT10.7575757575757576No Hit
TACTGCCATGGTTCCCACAATATTCATGACAGGAAATTTGATAGGTGCTA10.7575757575757576No Hit
AACTCAGATTGGCTCATGGGCCTCTTTGCAATAAGCTGTCAATTTTCCTC10.7575757575757576No Hit
GTTGTCCACGTTGTGCAGCAGCCCCTGGGCGTGGCTCAGCTGCCACTGCT10.7575757575757576No Hit
GGCACTTAGGGACAACCTGGAACCTGGAACCTTCGATCTTGGGGGGCTAT10.7575757575757576No Hit
CCTTGGTACCTATGCGAAGGGAGTTCTAACTATTATCCCGTTTAAAGGTC10.7575757575757576No Hit
GGATTACAAAGTCTTCCCCGATAATCATCATCCATTAGCTCCCATTTTAA10.7575757575757576No Hit
CATATATACTTACACAGTTTGAGCATTCACAGGCCACTAGAAGCCCATCT10.7575757575757576No Hit
TCCCGGGACTCTGTGCTGCTGTGCCATCGAGTAGAATGGGCGGGATTTTG10.7575757575757576No Hit
GTGGTAATGCCAGCCCATGGTCCAGCCAAAAGCATGGAATATGATGCCGT10.7575757575757576No Hit
TTTATGTACACTCCCTTCATTATGTATTCAGTAGCCCTGCAGTGGGCCAC10.7575757575757576No Hit
CTTGTGCCCATTGAATTTTCACAATTTCCCAGTTCCTGATTATCCATTGA10.7575757575757576No Hit
AGTATGGATAGCAAATAGTAGCATTGCCACAACTACTTCAGTGCATGTGT10.7575757575757576No Hit
CACTTCGGGTGTGCCCACCATTTTGTTAATGTGAATAATGCACCTAAGAA10.7575757575757576No Hit
CTTCCGAACACTGGTGGTGCCAGCTGTCTATAGAGAACATACGCAGACTC10.7575757575757576No Hit
TGACTCGGGTCTTCAATACTTAATTTCAGAGCATCCATCAGCAGGAACTT10.7575757575757576No Hit
CCCGGTGTCACCCCCAACCCGATGCCCAGAAGTGGTCTTCTCTGCCAATC10.7575757575757576No Hit
CCTCTGTGAGATCTTTCCCTTCTGGCATCTCAGTTCATTTCTGATTTTTC10.7575757575757576No Hit
GAAATGAGGCGCTGCCTTCTTCAGTCTCTTCAGCAGCTTGAGAGCATGAT10.7575757575757576No Hit
CTCCAAATAATAAAACTTCTCCCCTTTGCTGATGACGCACAAGAACAGAG10.7575757575757576No Hit
GTTTGATTATCGCTGCTAGAAACATAGTAAGAAGAGCAGCAGTGTCAGCA10.7575757575757576No Hit
GAGCCCAGAGGGTTGAAGCTTTTCGCTAAGGGTCGTAGGTAAAGATTCAT10.7575757575757576No Hit
AGGTAGGGCTATTAGTATCAGATGGAGGACCAAACTTATACAATATACGG10.7575757575757576No Hit
ACACTTATCAATGGATAATCAGGAACTGGGAAATTGTGAAAATTCAATGG10.7575757575757576No Hit
ATAAAAGGAAGGTCTCATTTGAGAAATGATACTGATGTGGTGAACTTTGT10.7575757575757576No Hit
CCATAAAATTCAACATTTTAAACTGCAGAATCAAAACGACATTATTACAT10.7575757575757576No Hit
GCTCAAGGCACAATGAGGAGGCAGGGTGACTAGACGAGAATGGTGTAAAA10.7575757575757576No Hit
CTGACATTCCCACTCAAAATGGTCACCTTTCTGACTCAAACGTACAATAC10.7575757575757576No Hit
ATATAGTGGTATTCCCTCCCCCTCGTGACTCGGGTCTTCAATACTTAATT10.7575757575757576No Hit
GAAGGGGGCTGTGCCATTTTCAGAGAACCCATTAGTTCAGTGTTCTTCCA10.7575757575757576No Hit
ATCTAAATTGGCTCCCTGCAAACTGCCATTAATACAAGAAATAGTACTGC10.7575757575757576No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGG10.7575757575757576No Hit
TTCTTGATCCGTCCAGACTCGAAGTCGACCCTGGCATCAATCCGGGCCCT10.7575757575757576No Hit
GTTTGGTCCTCCATCTGATACTAATAGCCCTACCTTTGATTGGGTTTGAT10.7575757575757576No Hit
CCACAGGTGACCCTTGAGGGTATTCCGCCACGGAAGATACCCCTGTTGCG10.7575757575757576No Hit
TATCAGCAGAGTTCACAAATACATTGAAAGTGGCTTTTTCTCGGTTTATG10.7575757575757576No Hit
ATCTGAAACTAATAGACCTCCCTTTGATTGCGTTTCATCCCACAGCTTCA10.7575757575757576No Hit
ACTGAACCCCATGCACAAACTCTTGAGGCATTTCCAAAAAGATCCAAAAG10.7575757575757576No Hit
CTTTTTTTCTTTGTTTGGAGGATGCCGCTTTGCACATCTTGTTAGTTCGA10.7575757575757576No Hit
AAAAGAGAATATAGATATTACAACAGACTTTCAAAAAAAAAGTATAGTAA10.7575757575757576No Hit
GATTGCCTGATGGGCGTCATTGCCATCAGCGGTCAAAGTTCCTGCTGATG10.7575757575757576No Hit
CGTCACCCGATCTACAAACTGAGTCAGCCTCGCACCCCGGAAAGTTATTG10.7575757575757576No Hit
CTATCGGACAGCCGGAGGAGCCTACCACATGTGCATCATCCCTTCTGTCT10.7575757575757576No Hit
ACAGTGTTCTGGTAAGTTCTCTTTTTGCATCTAATAATGTTTCCATGAAC10.7575757575757576No Hit
CTTCTTTCTTGCTCCGTCCAGACTCGAAGTCGACCCTGGCATCAATCCCG10.7575757575757576No Hit
GGGGGGCCGGTGGGCGTGCGGGCCGGGAGGATCGTGTGGCGGTTGGGGCC10.7575757575757576No Hit
GTGTGGCTCCAGTCTCGGGTAAGTGAGTGACAACTCCATACTTACAAAGT10.7575757575757576No Hit
CCATCGGATACTAATAGCCCTAAGTTTGATTGGGTTTGTTCCAACAGCAT10.7575757575757576No Hit
GCCCTAGACACCATGGCCTCCACCATGCTAGAAATTCCAACCGGTCTCCT10.7575757575757576No Hit
GGGGAGGACGCGCGCGGGGGGGAGGATTCACAGGGAGCCATGGGCTGTAA10.7575757575757576No Hit
GAAATACACCAAGACAATATACTGGTGGGATGGGCTCCAATCATCCGACG10.7575757575757576No Hit
GTTCCAGGTTGTCCCTAAGTGCCTGAACAATGAGAAGCAATTTTCTAGAT10.7575757575757576No Hit
AGTCCCAATAGTTCTCATTGCATGTACCATCTGCCTAGGCTGATTAGCAG10.7575757575757576No Hit
GTTGAAGACAGCTTGTGCCAGTAAGGTCCTGGCCACTTGCGCCATAGCGC10.7575757575757576No Hit
ATTGTTCTTTGCGTGACGATCTTCTTGGTCATGTTGTCTCTTAGTCTCGT10.7575757575757576No Hit
ACTAAGAAATGTAACGTGCCATCCAAAAGAGCTAAAATCAGATAACAAAA10.7575757575757576No Hit
GGGGGGGGGGGGGTGGTGGGGGGGTGGGGTTGTGGGGGGGTGGTGTGGGG10.7575757575757576No Hit
CGCCTAGACAATTATGTTATCGATACGGGAGGGAGATGTCGATACAATGC10.7575757575757576No Hit
GCTGAGGGTGGAGGAGAGGGGTATGAGGCATTTCTCGAGTGTTGGATTAG10.7575757575757576No Hit
CTGTACACAAGCATTTCCAATACAAACACCGATATGACATAATTCATTCA10.7575757575757576No Hit
ACCAGAACAGAGTAGGATGCAATTTTCCTCATAGACTCTGAATGTGAGAG10.7575757575757576No Hit
TCCCTGCAGGGAGGTTTCCGTGATACCCAACAAGACTCAGCGCCTAGCGC10.7575757575757576No Hit
ATCTAGGCCCACAGAAGGAAGACGGAAAACAAACCTGTATGGGTGCATTA10.7575757575757576No Hit
TGGCGCATCCGTGAGGGGGGACCCCAACATACCAAGATTCACACATATTT10.7575757575757576No Hit
CTCCAGGAGGAGAAGTGAGAAATGATGATGTTGACCAAAGTTTGATTATC10.7575757575757576No Hit
ACAGAGGGTAGGGACAGCCAAGATGAGAGGCCTCCGGGTTTAGTCAGCAG10.7575757575757576No Hit
CTTACACAGTTTGATCATTCACAGGCCACTAGAAGCCGATATGTGGCATT10.7575757575757576No Hit
AAAAACAAAACAAATAAAGCACCATTCAGGAATGTAAAGATTCATAATAA10.7575757575757576No Hit
AGTATGTCCTGGAAGAGAAGGTAATGGTGAAATTTCTCCAACTATTGCTC10.7575757575757576No Hit
CCCGGAGAGGTGCCGCAACCGGGGGGGAGATGCCGCAAGTTGGTGCGGGG10.7575757575757576No Hit
CTACAGGACCTGCAAGTTATTGGGAATCAACATGAGCAAAAAGAAGTCCT10.7575757575757576No Hit
CATCAGGAATGCAAGAGAAGAACCCCGCACTCAGAATGAAGTGGATGATG10.7575757575757576No Hit
CTCTTGAGGCATTTCCAAAAAGATGCAAAAGTGCTTTTCCAGAACTGGGG10.7575757575757576No Hit
ACCCGAGACTGGAGCCACACAAATGGGAAAAATACTGTGTTCTTGAAATA10.7575757575757576No Hit
CCAACTCTCCAAGCTGGTGTTCCTCTCTCGCTTTATCTTTCAGATAAATG10.7575757575757576No Hit
GTGCACAGCCACCCGCAAATCATTGAGGCCCCCCCACAGCCTGTGAAGAC10.7575757575757576No Hit
TGATGGTGGCGTACATGCTAGAAAGAGAATTGGTCCGTAAAACAAGGTTT10.7575757575757576No Hit
CATTATAGGTGCCATGCTCAGGATGTTTCTGAACCACTCGGGTTGATTTC10.7575757575757576No Hit
GGTATTTGCTGGTTTATGGAACAACAGACAGAATATTTGAAATTGGGACA10.7575757575757576No Hit
AAAGGGAGGTGGTCATGGGGAGTTACATAATTTCAGTTTTGCAAGCTGAG10.7575757575757576No Hit
CTTATGACTACCCAAAATACTCAGAGGAAGCAAAATTAAACAGAGAAGAA10.7575757575757576No Hit
GTATTATTACCACTTTTATTTCTGAGGAGAAGAAGTACCTCCTTTAGAGA10.7575757575757576No Hit
AGCCAAGAGAATAATGGACATGATTCCAGAGAGGAATGAACAAGGACAAA10.7575757575757576No Hit
GTGCCATCTATTAGAAGAGGCCTTATTTTCTCAATTTTCTTCTTTGTTGA10.7575757575757576No Hit
GGTCGGCTGCATATCCTGACCCCTGCTCATTTTGATGGTGATAACCGTAC10.7575757575757576No Hit
ATGTGGTTCCGAGCGGAGGGCTGTCCGCAGGCGGGGGCCGGCTTGGTGCA10.7575757575757576No Hit
TAATCATGGGAAAGATTACTCAAACACTAATGTTTCTTTGAATTGTTGTT10.7575757575757576No Hit
GTCTTGTGACCATTGAATTTTCACAATTTCCCAGTTCCTGATTATCCATT10.7575757575757576No Hit
ATACCTGAGGAGAGTGGCGCTTCTCAACAGGGCATCCCGTGATGTCAAGG10.7575757575757576No Hit
GTGTTGAGAATAGAACGATTCCTCTTGGGAATGCAGGAATGTGTAGTTGC10.7575757575757576No Hit
CTACTCAACTTGATCTTCGGCGTTTGGAATTAGTGCAACTATCGGGCACT10.7575757575757576No Hit
ATGTTATACAACAAAATGGAATTTGAACCAGATCAGTCACTTGTCCCTAA10.7575757575757576No Hit
CAACAGGACCTGGCTCGGAGACCACATCAAAGTGAACCAAGGGAAATGAT10.7575757575757576No Hit
CTTATAGATATAGTTATCCATATACAAAAAACTTAACAAATAAAAGTTGA10.7575757575757576No Hit
TTTCTGTCCCAATTGCTCTCGCCACTTTTCATTTCTGCTCTGGAGGTAGT10.7575757575757576No Hit
GTGCATGGGGTTCAGTCGCTGGTTTGCCCTATTGACAAAGTTCAGATCGC10.7575757575757576No Hit
CTCTTATCCCTCTCAGCGACATCTCCGTGCTTGGGGTCATGTCGGGCAGT10.7575757575757576No Hit
CAATAAAACCGACTTGAAGACTGTGTTCACTGGCAAACACTAAATGCAGA10.7575757575757576No Hit
CAAGAATATTTATCAAAAGACAAAAATACCTAGAAACAAACAAAGTAAAA10.7575757575757576No Hit
AAGTAAAAGTCACGATGAAAAGTAGCTCAGGATGAAGCAGAAAGTCTGAA10.7575757575757576No Hit
AGTGAAAGCATTTAGACATCAAATTGAAATATGTCCCATTAGGAATTTTA10.7575757575757576No Hit
CTTCAGCAGATTGAGAGCATGATTGAGGCCGAGTCTTCTGTCAAAGAGAA10.7575757575757576No Hit
GTATCATAGCTCAAGTCTTCTTTCTGAAGTTGTTGGAACTTTGTCACCAT10.7575757575757576No Hit
TGTATATACAGCTCGCTGAAGAGGTCCATGACCTCAAAAAAAGATCAAAT10.7575757575757576No Hit
GTAGATTGTATTGGGTTATTTGGTTTGGCCAAGATTAGGTATCTAGACTC10.7575757575757576No Hit
GACTGAAATGGTTCAAATTCCATTTTGTTGTATCACATTGTGGGATCTTG10.7575757575757576No Hit
CAACAGCTATTCTCAGAAAGGCAACCAGGAGATTGATCCAGTTGATAGTA10.7575757575757576No Hit
CTATATGATGCAATCAAATGCATGAAGACATTCTTTGGCTGGAAAGAGCC10.7575757575757576No Hit
GGGGGGGGGGAGGTGGGCTGTGTGCGGGGGGGGTGGGCGGGCGGGGGGGG10.7575757575757576No Hit
AAAAAGGACATACTAACAGAATACAACGCTAGAAAGACGCAGTCAAGCAA10.7575757575757576No Hit
CATTGAAGTACTTCAGGTCAATGCTTGCTAGCATTTCTGCTGGTATTTGT10.7575757575757576No Hit
ACATTGTGGGATCTTGTGACCATTTAATTTTCACAATTTCCCAGTTCCTG10.7575757575757576No Hit
TCATATAACCACTCAGTATCTGCCTTTTCGTAATTGGCTTATTTGACTTA10.7575757575757576No Hit
CACCATGTCAAGCGTTCCGGTAGACTGTTTCCTTTGGCATTTCCGCAAGC10.7575757575757576No Hit
ATATAGTGGTATTCCCTCACCCTCGTGACTCGGGTCTGCAATACTTAATT10.7575757575757576No Hit
GGCCCCGGGCGGCCCTGGAGGCCAGGCTGCGGGAGCCCGAGAAACTGTGC10.7575757575757576No Hit
TATCAGTGTAGTCAATGTTGTGCCACGAGATCCCTTCGCTCTGGTACTCT10.7575757575757576No Hit
ATCAGGAACTGGGAAATTGTGAAAATTCAATGGTCACAAGATCCCCCACT10.7575757575757576No Hit
AGGCTGGGGAAGTTCGGTGGGAGACTTTGGTCGGCAAGCTTGCGCATAGT10.7575757575757576No Hit
GTACTGATCCAAAAACGAAGACATTGAGCGACAAAGCTTCATACCAATCA10.7575757575757576No Hit
CAATCTTAACTGTGCATCAGACTCAACTTCAAGGCCTTTTCAAGGTAACA10.7575757575757576No Hit
GAGATTGATTCTGTAAACAATGCTGTGGTAATGCCAGCCCATGGTCCAGC10.7575757575757576No Hit
AACTTGCAGGTCCTGTAGAATCTGTCCACTCCTGCTTGTATTCCCTCATG10.7575757575757576No Hit
NAATATCTTTGTAGTCAAGGAAAATTAAAAGGCCAGGAAAGTGAAGAGAT10.7575757575757576No Hit
CCTATGCACTGTTGTTAGACTTATGGAATATCCCACATTTAGAATTTACC10.7575757575757576No Hit
GACTGATGGAATGTTCTGGTCTGAGGGACCAGCTTGCAGCACTCCTATTG10.7575757575757576No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers