FastQCFastQC Report
Fri 2 Oct 2020
HTGTLBGXG_n02_S2_R1_B09_FD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHTGTLBGXG_n02_S2_R1_B09_FD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences146
Sequences flagged as poor quality0
Sequence length151
%GC46

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG21.36986301369863No Hit
AGTTAAAGCCTGAAATAGCAAAAAGACCCAAAGTCAGGGGTCAAGAACGT10.684931506849315No Hit
TTTCTTAACTTCTTGCTTCTTTCTACATAGAGAAACAGTTGGTAACTTTT10.684931506849315No Hit
ATTCAGGATCGAGACTCCCAAGTCCGTACTTAGCATGTTGAACATGACCA10.684931506849315No Hit
GTCCTGTAGAATCTGTCCACTCCTGCTTGTATTCCCTCATGGTTTGGTGG10.684931506849315No Hit
CCATACAGGTTTGTTTTCCGTCTTCCTTCTTTGGTCCTACATTTGCTTAT10.684931506849315No Hit
GATTGGAGGAGTAAGGATGGTGGACATCCTTAGACAGAATCCAACTGAGG10.684931506849315No Hit
CTAATTTAATGTACTCAAACAAAATTGAAATACTAGGTAAAGGCTACATG10.684931506849315No Hit
TATTTAATGTCAGTGCTCTTATTAGATAGCCTCTCTTATTCAGTCTTTGT10.684931506849315No Hit
ACAAAATACTGGTGGGATCGGCTACAATAATCCAACGAGGTTCCTCTAAT10.684931506849315No Hit
ACTAAGGGCTTTCACTGAGGAGGGAGCAATAGTTGGAGAAATTTCACCAT10.684931506849315No Hit
AATCTGTTTCCTTTCTGGCCCTTCTAATTAAAGAGAAGAAAGCAAGACTT10.684931506849315No Hit
GTTCCAGGTTTGCCTGCACAGAGTCTCAGGAAATGATCTGATGTCTTCCC10.684931506849315No Hit
TATAGTGGTATTCCCTCCCCCTCGTGACTCGGGTCTTCAATACTTAATTT10.684931506849315No Hit
CAATCGGGGAAACATCATCTCCTATTTGATCAACTTCAATACAGCGTGAG10.684931506849315No Hit
GGGAGAAGAGACCTCTATTTCTGTCAACACACAGCACTTGGTCACTGTCC10.684931506849315No Hit
GATTAAAACAATTTTCAGGGACTCATGGCTAATTGGTCACCAGGTCATTT10.684931506849315No Hit
GGGGACAAGGTCAGCAGCTGCTCGAGAGACTCTTTGCTTCTCTCCCACCA10.684931506849315No Hit
GGGGGGGGGGCGGTGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTG10.684931506849315No Hit
TTCATGAGGTTATTTTGGGGTTACTGGTTGCTGATCTGATAATTTAGACC10.684931506849315No Hit
GCATTGGCCAACACCATAGAAGTCTTTAGATCGAATGGCCTAACAGCTAA10.684931506849315No Hit
GCAGATGTACACTCCAGGAGGAGAAGTGAGAAATGATGATGTTGACCAAA10.684931506849315No Hit
ATGTGACACAACAGGGGTAGAGAAGCGTAAATTTGTTGGTGATTTGTTGG10.684931506849315No Hit
TTATATCACTTGTCAACGTAAGAATGGCATCCCTTGGCATAAACACAACA10.684931506849315No Hit
GGGTAGCTCCATGCTAAAATTAGCCACAAATCCATAGCGATAAAAAAAGC10.684931506849315No Hit
CTACCGGAGGGGAATGAACCAGGTGGGGTGGCACACACAGGGGGGGGGGG10.684931506849315No Hit
GCCTTTAAGCTGTGAGAGAGAAAAAGCCTTAAGGTGACCTCAGGCATGAA10.684931506849315No Hit
GAGGAAAGCTTTCCACAAGAGGGGTCCAGATTGCTTCAAATGAGAATGTG10.684931506849315No Hit
CATGAGGGCTGTGCTTCCAGCAGGGATTCACAAGACAAGGCACCCAGAGT10.684931506849315No Hit
GAACAATATCAAATGAGAAAATCAGAAACAAAAAACGTGGAATCAATAAA10.684931506849315No Hit
AGGGAGCCCAATGCAGAAGTGGGACTAGATCCCAGGACCCTGAGATCATG10.684931506849315No Hit
ACTATGTTGAGCCAAAGAGCATCTTTCACAAAGAACATGATAAAAGTCTC10.684931506849315No Hit
GTGTGGTCTGGCTGGAACCCTGATGTGCAGGGACAGACCGAGGTGCATCA10.684931506849315No Hit
GCTAATCCTCAACCCTATTGCTGCCTTGCATATGTCTACGGCTTGTTCCT10.684931506849315No Hit
GCTCAAAAGAGAAATAACGTTCCATGGGGCCAAGGAGGTGTCACTAAGCT10.684931506849315No Hit
CTCTTACTTGATCCATCATTGCCCTCTGGGCAGCTGTTTGAAATTTTCCT10.684931506849315No Hit
GACTGTGGTTCCAGAGAGAAGCATTTGCGGGACAGAGCTTGTGTTATGTT10.684931506849315No Hit
TTTTTATTGTCAGTGCTATTATGAGTTAGCCTGTGTTATTGTGTGTTTGT10.684931506849315No Hit
GTACAGGTGCCTGAGAGGGTCAGATATAGAAGATGCCCATAGCTGGCGTC10.684931506849315No Hit
GACCAGGCACCGTGCCCATTGGGATCTCTAATTCCCAGATATCCAGGCGC10.684931506849315No Hit
CCTGAATCCCTTTGTCAGTCATAAAGAGATTGATTCTGTAAACAATGCTG10.684931506849315No Hit
GTGAAGAAATCTTCCCAAAGGCCGAGCTTATGGAAAGATAAAGTGATTCA10.684931506849315No Hit
GGAAATAGCAATAAGACCCAAAGTTAGGCGTCAAGAAGGGAGAATGAACT10.684931506849315No Hit
AGATCGGGGAGAACAGCGGGGTTTTCCAGAGCGGTCGCCGCCGTGAGGAG10.684931506849315No Hit
GCATGAACCAGTCTCGTGACATTTCCTCGAGGGTCATGTCAGAAAGGTAG10.684931506849315No Hit
CTAATTCACAAGACACAGAGATTTCTTTCACAATCACTGGGGACAACACT10.684931506849315No Hit
AAGATATACTGTTGAATACAGATTTTTAAAGTAAGTTCCTGCACACTTTC10.684931506849315No Hit
ACATTTGCTTATCATTGGGAGCCGCTGAAATTCATCGATGGCTTCTCAGG10.684931506849315No Hit
TAACAATATTCAAAAAAAAACTAATCCTGATTTAGATCGCCAATCTATAA10.684931506849315No Hit
GTGCGCGGCCCTGGACGTGGGAGGCTGCGAGTGGGCGGGTAGGCGCGGGG10.684931506849315No Hit
TTCTTGATCCGTCCAGACTCGAAGTCGACCCTGGCATCAATCCGGGCCCT10.684931506849315No Hit
GGAAAGAACACAGATCTTGAGGCTCTCATGGAATGGCTAAAGACAGGACC10.684931506849315No Hit
CAATTATTGGCTCAGCAATTGACTGCTAGTCTCTGCCTCGTACTATCAAC10.684931506849315No Hit
ATTCGACACTAATTGATGGCCATACGAATTCTTTTGTTCGCTGTCTGCCT10.684931506849315No Hit
ATTTAAGAGGATCACGTGTCATAAGAGGAAAGAAAGTGATTCCAAGAGGA10.684931506849315No Hit
AGCAGGTACTGATCCAAAATGGAAGCCTTTGTGCGACAATGGTTCAATCC10.684931506849315No Hit
ATACTGACATCAGAGTCACAGCTGGCAATAACAAAAGAGAAGAAAGAAGA10.684931506849315No Hit
AGTAAACCGCACTGCCTCTGGATATTGGTAAACATACACTTTAGTGGTTA10.684931506849315No Hit
GGTTAGAGCTATATAGTAAGGAATCTCTCTATCTGGGAACCCAAGTCCCC10.684931506849315No Hit
AATATGGAGAGAATAAAAGAACTGAGAGCTCTAATGTCGCAGTCCCGCAC10.684931506849315No Hit
GAAATCAACCGGCAGCAACTGCATTGGCCAACACCATAGAAGTCTTTAGA10.684931506849315No Hit
TTCATATGCCTTATTGAATTCATTTTGGACCCAGCTTGCTAGAGATCTGG10.684931506849315No Hit
TCATCATCCCAGGACTCAGTGATGATGTGCCATCTATTAGAAGAGGCCTT10.684931506849315No Hit
CAGGAGGGAAGAGAGGCAGCCTTGAAGCTGTGAGAGAGAAAAAGCCTTAA10.684931506849315No Hit
GTATTGAGTAAGGACCTCATGGGACTTTTGATAGATCAAAGAGGTAACGT10.684931506849315No Hit
TGACTAACCAGTCCTCATTATCCTCCTGTAAAACAGGAAGAACAACATAT10.684931506849315No Hit
GCTTAATGCTGGGCCATATCTCTTGTCTTCTTTGCCCAAAATGAGAAATC10.684931506849315No Hit
GCTCTTGCACTTGCGGGAGGGGTCGCTACCAGCATTCTTGGGAGACAGGC10.684931506849315No Hit
GTAGTACTTCAATGAATCAACAAAGAAGAAACTTGCGAAAATAAGGCGTC10.684931506849315No Hit
CCCACCGAACTTCCCCAGCCTTGAAAACTTTAGAGCCTATGTAGATGGAT10.684931506849315No Hit
CTTTCACAATCACTGGGGCCAACACTAAGTGGAATGAAAATCAAAATCCT10.684931506849315No Hit
GGATTTGCTGAGCTTTGTGTATGAATTTCCTTTTTTAACTAGCCATATTA10.684931506849315No Hit
CCACGATCCTTACTACTCAAATCTGTGTGCTGTGGCACATTTCCAAGAGA10.684931506849315No Hit
GACACGGATACAAGACGGGTTGTTTGGTGTTCGAAAACCACGGAAACATC10.684931506849315No Hit
GTATACGAAACCTCTAATCTCCATCCCAGGTCTTGCGATAGCCCATCTAT10.684931506849315No Hit
TGATTACATATATCACCAGAAATCAACCCGAGTGGTTCAGAAACATCCTG10.684931506849315No Hit
TCAGTATCCTTTCTCAAATGAGCCCGTGGTGTTTTTATGCGCGCGTACGG10.684931506849315No Hit
CTTCAATATAAACACTGCCTGTTCCGCCGGCTACTGGGAGAAACCTTGTT10.684931506849315No Hit
GACCTCTTCTTTCTTGCTCCGTCCAGCCTCGCAGTCGACCCTGGCATCAA10.684931506849315No Hit
TAATAAGAAAATAGAATGTGTGATAGCTTACAGGTAATCTCCAAAACAAG10.684931506849315No Hit
CCAAGTGGGTATGCACAAACAGACTGTGTTCTAGAGGCTATGGCTTTCCT10.684931506849315No Hit
TCCTATATGTGAGAACCAATGGAACCTCCAAGATCAACATGAAATGGCGC10.684931506849315No Hit
CAGGTGGACCAGGGATTGCTCACATTCTGCTGCATCCTCAGGGGTCTGCC10.684931506849315No Hit
CCACTTAACTCACAAACTCTCGATGCCTATCAGCAAGACAGCATTAACCC10.684931506849315No Hit
AGAAGATGGTCCCGCAAAGAACAATAGGGAAGAAAAAACAAAGACTGAAT10.684931506849315No Hit
GTACCGGCTTCTGGTTGCCTTAGGGACAAGAGACTGAAATGGTTCAAATT10.684931506849315No Hit
CAACTGGATCAATCTCCTGGTTGCCTTTCTGAGAATAGCTGTTGCTCTTC10.684931506849315No Hit
ATCAAGTTCTATCCAGCTTGAATCAGTCAATTCACATGCCTTATTGAATT10.684931506849315No Hit
GTTCAATGCCGTGGCAGCTAAGTGGCAAGATGTATAGCACATAAACGCCT10.684931506849315No Hit
GACGAGAAGATCATTTGAGTTAAAGAAGCTGTGGGATCAAACCCAATCAA10.684931506849315No Hit
TCACTGAGGAGGGAGCAATAGTTGGAGAAATTTCACCATTACCTTCTCTT10.684931506849315No Hit
GCCTAAATTGAAATCAGTACAGAAACGGAGTAAATTCAGCCACAGACTCC10.684931506849315No Hit
GGACAACATCTTCTGCTATTTCCTCAAGTTCTATCCAGCTTGAATCAGTC10.684931506849315No Hit
GACTAATTCACAAGACACAGAGATTTCTTTCACAATCACTGGGGACAACA10.684931506849315No Hit
AAGGTCATCTTTCAGACCAGCACTGGAGCTAGGATGAGTCCCAATAGTTC10.684931506849315No Hit
CCTTGATACTACTAAGGGCTTTCACTGAGGAGGCAGCAATAGTTGGAGAA10.684931506849315No Hit
CTGTTTCTGAGAGGGCTCCCTTAGGGCAATCATTTTCCACGGCTTTCAAA10.684931506849315No Hit
GCCTAATTCACAAAAGTTACCAACTGTTTCTCTTTCTAGAAAGAAGCAAG10.684931506849315No Hit
GTCTTACCCTCATTAATATTTTTTGTTTTAAAATTATAAACCATCCTACT10.684931506849315No Hit
GAGTTGGAACAATAGCAATGGAGTTAATCAGAATGATCAAACTTGGAATC10.684931506849315No Hit
CCAAGGAGGAGTGGGTATCGGCCAGGTGAGTGGGGACATATTGAGGAGGG10.684931506849315No Hit
GTATTGACTGATTCAAGCTGGATAGCACTTGATGCAAGAGTTGAAGCTGT10.684931506849315No Hit
GATCTATCCAGCTTGATTCAGTCAATTCACATGCCTAATTGAATACATTT10.684931506849315No Hit
ATCTGGACCACTGTTGTGGAAACATTTAATCTTGTACTACCATTCAGACC10.684931506849315No Hit
GTCTATATGCGTCTCCACAACTTGAGGGGTTTTCGGCTGATTCTAGAAAA10.684931506849315No Hit
AGTCATCACTGGGAAAGTGAGCCCAGGATGTGCTTAGTAACTGGGTTCTG10.684931506849315No Hit
CTGCTAGGGAAAAATATCTCTAATAGATTGCAGCACTTCTGGTACATCTG10.684931506849315No Hit
CTGTCATACTGTTTAAGGTCTCCAACATCTTTGCAGTCATCAAAGTCTAC10.684931506849315No Hit
CCACCAGATGGCGCCAAAGAAAAGCCGAAAGAACAGTTTTCGGAGAATTC10.684931506849315No Hit
ATCTAATCAGAGACAGGCTGTAAACATACAAAAAAGACTGGATCCTAGCT10.684931506849315No Hit
GGGTACATGTTCGAGAGTAAAAGAATGAAGATTCGAACACAAATACCAGC10.684931506849315No Hit
AGCTACATCTCAGGACCCTGAGCAGCACCTGACTGATCTGAGGGAACCCG10.684931506849315No Hit
GAGCCATCCTGGCCACTCGGGGTCTGCTTTAAGACCAGTTTCCAGGGAGG10.684931506849315No Hit
TCTCAGGGTCTGCCAGGCGAGTATGCTCGCCTCTGCTTGGCACCCCCTTC10.684931506849315No Hit
CGCTCAAGTGAAGGAAAAGAGGTGAAGGTGTTTCTTCTGATATTTTATGT10.684931506849315No Hit
GCCAGAAAGTGAGTGGCCTATGGGTTAAGCTGCTGACTTCAGCAGCTCCC10.684931506849315No Hit
GATACTGGGCCATTAGGGCCAGGAGTGGAGGAAGTAGCATGCGACAAAGG10.684931506849315No Hit
GGAGGGCCGGATTCAGGTTAGTCCAAAACAGCCAAGTGGTCGGGCTGATG10.684931506849315No Hit
TTCAGTGACTATCTGCACTACCACATCAAGTGCTCTAAGGTGAGGCGTCA10.684931506849315No Hit
ATTCTTCTGAGCCTCTGTGAGCGGGGGAAGATTCCGGGCTTCCGCTAAGT10.684931506849315No Hit
CAGCTCTGGGTCACAGAGTGTAAGGACAAGTATTGGGACTGACAATGTTA10.684931506849315No Hit
ATAAACAGCACGTCAAAATTACCCGCATGAGGGCTGTGATTGCAGCAGGG10.684931506849315No Hit
ACTTCAGTCAATGCACCTGCATCCTTTCCAAGCACTGTAAGTCGGTTGGT10.684931506849315No Hit
GGTGTATCCTGTTCCTGTTCCATGGCTGTATGGAGGATCTCCAGTATAAG10.684931506849315No Hit
ACTGTAAGAAACTTTTATACTTGGTGAAACAGCCCTTTTAATGTGTCCTT10.684931506849315No Hit
GTGAGAATACCATGGCCACAATTATTGCCTCAGCAATTGACTGCTCGTCT10.684931506849315No Hit
AGTATATTTTGTTGCTCTTGGAGAGCCAGATTTTGGAGAGATGTTAGATA10.684931506849315No Hit
TAGCATGGTTGCTCCGACTGACAAAGTTTCAATTACCACCTCTTGAATTT10.684931506849315No Hit
TAGCAAGACAGTCCAGTGTCCATATAGAGGAAGAGGGTGGCTCATGTAGT10.684931506849315No Hit
ACTTTACTTTCTGAAGTAGCTGGACCAGAGAAATCAGAGCTGGAGCTGAG10.684931506849315No Hit
AACCATCATAGGAGACAATGGATAAAATGAATCACCTCACATGAGAATAG10.684931506849315No Hit
GCGTAAAATCGCAGCTAATGGATGATGATTATCGGGGAAGACTTTGTAAT10.684931506849315No Hit
CAGCTAGAGGGTTTAGGATTAGCTCATCTTTCAGTTTTGGTGGGTTCACT10.684931506849315No Hit
ATGTGCTTGGGACATTTGACACTGTCCAAATAATAAAACTTCTCCCCGTT10.684931506849315No Hit
TCCAAGAACTGAAAGTAGTTTCGTTGCCTTGTTGTAATTGAATACTTGAG10.684931506849315No Hit
GCTTAATATAGCCCCCCAAGATCGAAGGTTCAAGGTTCCAGTTTGTACAT10.684931506849315No Hit
AGATCAAGATTTCCAGAAACATGTCACTTGTCTGAGAACTATGAATTAAA10.684931506849315No Hit
AAAGGAATATGTAGCGTTAAAAATTGAAAACCACTGATAGAAAGTAGTGT10.684931506849315No Hit
ATTTATTTGAGAGCACAAGCAGGGGGAGTGGGAGAGGGAAAAGAAAGCTC10.684931506849315No Hit
GGACTGGCAACATACATGGGCCAGGCTTACGTGCCTGGACTTTTCTGGCA10.684931506849315No Hit
CAAACAGACGGTGTTCTAGAGGCTATGGCTTTCCTTGAAGAATCCCACCC10.684931506849315No Hit
CACTGACTCGGGGCCGTTGGTCGCGGGCGTCGTTGATGGCGAATAAGGTT10.684931506849315No Hit
CATCTTTTCATTCACTGGAGAGGAGATGGCCACCAAAGCGGACTACACCC10.684931506849315No Hit
GTAGGAGTCAATCTGATTCCTTAAGTCAGTCAGAAAGAAGCCAACAGACA10.684931506849315No Hit
GTTGGTGTCAGTTTGTTAATGGCGAAGAGAAATAGATTCCTTTCTTGTCT10.684931506849315No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers