FastQCFastQC Report
Fri 2 Oct 2020
HTGTLBGXG_n02_S2_R1_A09_FD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHTGTLBGXG_n02_S2_R1_A09_FD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences110
Sequences flagged as poor quality0
Sequence length151
%GC44

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGCAAGCTTGCTCATAGTTCCTGTAATCTCAAATTTTTCTTCAATTGTC10.9090909090909091No Hit
GTAAAAGAATGAAGATTCGAACACAAATACCAGCAGAAATGCTAGCAAGC10.9090909090909091No Hit
CAGTGATGCTGTGCCATCAATTAGAAGAGGCATTATTTTCTCAATTTTCT10.9090909090909091No Hit
GTATGCTAGAGTAACGTTTTCGTTTCATTAAAAAAAAAACGTCACCGAGC10.9090909090909091No Hit
AATCCGGGCCCTAGACACCATGGCCTCGACCATGCTAGAAATTCCACCCG10.9090909090909091No Hit
CATTGGGAACAGCTGAAAGTCATCCATGGCTGCACAGGATGCATTGAGCA10.9090909090909091No Hit
ATTCTCAAGCCTTATTGAATTCTTTTTGTACAATGCTTGCTAGAGTTCTG10.9090909090909091No Hit
GCGTAAGAAAGGCAATAACATTATTTTAAGGTGTAAATTGTCTCAAACAT10.9090909090909091No Hit
GCTGACATGAGTATTGGAGTAACAGTGATAAAGAACAACATGATAAACAA10.9090909090909091No Hit
CTTTGATGACTGCAAAGATGTTGGAGACCTTAAACAGTATGACAGTGATG10.9090909090909091No Hit
GGGGAATGGATGTGCTTGGTGACACACAGAAGTCTCCTGCGTGGGTTGGC10.9090909090909091No Hit
TCCTTAGACAGAAACCATCTGACGAGCAAGCCGTAGACATATGCAAGGCA10.9090909090909091No Hit
TACTTCAATGAATCAACAAAGAAGAAAATTCAGAAAATAAGGCCACTTCT10.9090909090909091No Hit
CAAAAATACTGTGTTCTAGAGGCTATGGCTTTCCTTGAAGAATCCCACCC10.9090909090909091No Hit
CATGGACTCAGGCCCTCCGTCCGGAGCAGGCCCTCTTTTCAAACCGGATT10.9090909090909091No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10.9090909090909091No Hit
GACAATATACTGGTGGGATGGGCTCCAATCATCCGACGATTTTGCTCTCA10.9090909090909091No Hit
GTGTGTGCCACTTGTGAACAGATTGCTGATTCACAGCATCGGTCTCACAG10.9090909090909091No Hit
ATTCGACACTAATACATGGCCATCCGAATTCTTTTCGTCGCAGACTGGCT10.9090909090909091No Hit
CTACTGGCCATTTCTTGTCTTATAGTGAAAAGCCTAGTTTTGATTCTTGC10.9090909090909091No Hit
TAATAAAACTTCTCCCCTTTGCTGCTGCCCCACCAGAACAGAGTAGGATG10.9090909090909091No Hit
GTCTAATTAATATTGTAATTCTTTTTGCTCATGATCATTCAAAATAACTT10.9090909090909091No Hit
GATGAAGGCACATCTGGGGTGGAGTCTGCTGTCCTGAGAGGATTTCTCAT10.9090909090909091No Hit
TGATAAAGGGAAAGAAGTCCTCGTGCTATGGGGCATTCACCATCCATCTA10.9090909090909091No Hit
AACAAAAGCAATGGAGTTATTGAGAATGATCAATCGTGGATTCGATGAGC10.9090909090909091No Hit
GCCAAGATGGATCTTAAATTCTTCATAAAAGACTACAGATACAAATATAT10.9090909090909091No Hit
GGGGCGGGGGGTTCTGGGGTGGGGGGGGGGCGCCGCGGGCGGGGGCGCGG10.9090909090909091No Hit
GAATACCACTATATGATGCAATCAAATGCATGAAGACATTCTTTGGCTGG10.9090909090909091No Hit
GCCTCCACCATGCTAGAAATTCCAACCGGTCTCCTATATGAACTGCTAGG10.9090909090909091No Hit
CATATAGACTGTTGAATACAGATTTTGCCAGTAAGGTCCTGCACACTTTC10.9090909090909091No Hit
AGTGGGCACTCGGTGAAAATATGGCACCAGAAAAAGTAGACTTTGATGAC10.9090909090909091No Hit
GAGTAGGATGCAATTTTCCTCATTGACTGTGAATGTGAGAGGATCAGGGT10.9090909090909091No Hit
NNNNNNNTGTNTATCANNTNTNCTCCTTATTTNANCTTGATTTCTGAAGT10.9090909090909091No Hit
GTACTTGTTGTTGGGCCATTCCTATTCCACCATGTTACGGCCAGAGGTGA10.9090909090909091No Hit
ATTAAGTGCAACACTTCAATATAAACACTGCCTGTTCCGCCGGCTACTGG10.9090909090909091No Hit
TCCCAGGACTCAGTGATGCTGTGCCATCTATTAGAAGAGGCCTTATTTTC10.9090909090909091No Hit
AGACACCATGGCCTCCACCATGCTAGAAATTCCAACCGGTCTCCTATATG10.9090909090909091No Hit
GGCCAATGCAGTTGCTCCCCGTTGATTTCTGTTTAATGTCCAATCATAAG10.9090909090909091No Hit
GAGGACGACACCACGCCCCCTCAGATTGCCTGATGGGCCTCTTTGCCATC10.9090909090909091No Hit
AAACAAGGGTGTTTTTTATCATTAAATAAGCTGAAACGAGAAAGCTATTA10.9090909090909091No Hit
CCCATGTTCCAATATGTGAGAACCAATGGAACCTCCAAGATCAAGATGAA10.9090909090909091No Hit
ACCTGGGAAGCATATTAGATGTATCGTATACTTTGTTGAAACTTTCGCTA10.9090909090909091No Hit
ATATAGTGGTATTCCCTCCCCCTCGTGACTCGGGTCTTCAATACTTAATT10.9090909090909091No Hit
GATTTCCATTTCATCGACGAACGGGGTGAATCAATAATTGTAGAATCTGG10.9090909090909091No Hit
TTCGTATACTTTGTTGAAACTTTAGATAGGAGCATTTGCGAAAAGCTTGA10.9090909090909091No Hit
CATCAACACATCAATGTTATCGTCAAGTTTTATATCTGTCTCTTATACAC10.9090909090909091No Hit
AATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTGGCTGTAAGTAAGT10.9090909090909091No Hit
CAATGCATCCTGTGCAGCCATGGATGACTTTCAGCTGATCCCAATGATAA10.9090909090909091No Hit
GCATCTTTGGTCATCGTATTTAATGTCAGTGCTCTTATTAGATAGCCTCT10.9090909090909091No Hit
GCGTGCCCATCCTCTTGGTCATGTTGTCTCTTACTCGCCTTTTTCTTTGA10.9090909090909091No Hit
GGCAGGTGCTGTCCTTGTCCTTGTGCAGGTAATGCTGCTGCCAGAAGCGC10.9090909090909091No Hit
GTGGGAGCCGTTGGTCGGCAAGCTTGCGCATAGTTCCTGTAATCTCAAAT10.9090909090909091No Hit
GATACTAATAGCCCTACCTTTGATTGGGTTTGATCACCCAGCTTCTTTAA10.9090909090909091No Hit
ATAAGGAGGAGAGTTGATACAACCCCTGGCCCTGCAGATCTCAGTGCCAA10.9090909090909091No Hit
GTCAATGCTTGCTAGCATGTCTGCTGGTATTTGTGTTCGAATCTTCATTC10.9090909090909091No Hit
GTTTTATATACCTTAGGGTAATGAACTGTACTTGTTGTTGGGCCATTCCT10.9090909090909091No Hit
CCACTATATGATGCAATCAAATGCATGAAGACATTCTTTGGCTGGAAATA10.9090909090909091No Hit
CAGTAGGGGGCAATGAAAAGAAGGCCAAACTGGCAAATGTTGTGAGAAAG10.9090909090909091No Hit
TAGTGGTCCCTTTGATTGGGTTTGATCCCGCCGCTGCTTTTACTCAAATT10.9090909090909091No Hit
AGTTTATCTACCCTTGTTTGTTGAACAACTTCCATTGTTTCAAGGCATGA10.9090909090909091No Hit
GTACATACTTCTCTCTACCTTTCTGACATGACCCTCGAGGAAATGTCACG10.9090909090909091No Hit
GAAATACACCAAGACAATATACTGGTGGGATGGGCTCCAATCATCCGACG10.9090909090909091No Hit
ATAATCAGAAAAGCGAAAGTGGACGACAAACACAGATACAGGTGCACCAC10.9090909090909091No Hit
CATGATCTCAGAGAACTATTCTTACTTGATACGTCCAGACTCGAAGTCTA10.9090909090909091No Hit
TGGTGCATGGGGTTCAGTCGCTGGTTTGCCCTATTGACAAAGTTCAGATC10.9090909090909091No Hit
GTATCTAGAAGCGATAATAAAACTTTGGTCAACATCATCATAACTCACAT10.9090909090909091No Hit
GAACTGAGAAGTTGACAATAGCGTATTCGTCATCAATGATCTGCGAGCTC10.9090909090909091No Hit
GCTCATTAGGGTTCGATATGGGATCCTGTCTTTATTGGTTCCATTGGAAT10.9090909090909091No Hit
CTCAAGGAAATGAGAAGTTGCCAAAAACTTATTCGTCATCAATTATGTGT10.9090909090909091No Hit
GTTGTTGTGGGGGGCAGGGGTTGGGGTAGCTTGGGGGGGACGGCAGGCGG10.9090909090909091No Hit
GGTATGAAGAATTCACAATGGTTGGGAGAAGAGCAACAGATATTCTCAGA10.9090909090909091No Hit
CCCAGGAATATTTGAGAATTCATGCCTTGAAACAATGGAAGTTGTTCAAC10.9090909090909091No Hit
GTTGCTATTTGTTAGCACCTATGGATCCTACAGCATCAAGATGTAATTGG10.9090909090909091No Hit
TGTGAATGTGTGTCTTCTCAGATTTTATTTTTTTGGCTTTCTCTAGGTAA10.9090909090909091No Hit
CTCTTATTCAGTCTTTGTTTTTTCTTACCTATTGTTATTTGCGAGACCAT10.9090909090909091No Hit
TCCATAATCACATCCTGTGCCTCCTTGGCACTGAGATCTGCATGGCCAGG10.9090909090909091No Hit
AACTAACTCAAGGTCGCCAGACTTATGATTGGACATTAAACAGAAATCAA10.9090909090909091No Hit
CATCAATATGATACTAATAGCCCTACCTTTTATTGGGTTTTATCCCCCAG10.9090909090909091No Hit
GAGCATACCATGGCCACAATTATTGCCTCAGCAATTGTGTGCTCGTCTCT10.9090909090909091No Hit
CAGCAATTGACTGCTCGTCTCTCCCGCTGACTATCAACTGGATCAATCTA10.9090909090909091No Hit
GTGATGCTGTGCCATCTATTAGAAGAGGCCTTATTTTCTCAATTTTCTTC10.9090909090909091No Hit
GGCATTACCAAAGCATTGTTTACAGAATCAATCTCTTTATGACTGACAAA10.9090909090909091No Hit
GGGGGGGCGGCGGGCGGGGGGGGGAGGGGGGGGCGGCCGGGGGGAGGAGT10.9090909090909091No Hit
ACAGATCTCAGTGCCAAGGACCCACAGGATGTGATTAGGGAAGTTGTTTT10.9090909090909091No Hit
AGAGACTGGTGCACCCCAGCTCACCCCGATTGATGGACCACTACCTGAGG10.9090909090909091No Hit
CACATATAGGAACATGGGCCTCGACACGTGGCCTATCTCAGTCCTCAAGA10.9090909090909091No Hit
GGGGTGGGGGGGGGGGGGGGGGGCCCGGGGGGGGGGGGGTGGGGGGGGTG10.9090909090909091No Hit
AAGAAGAAGTGCTAACGGGCAACCTCCAAACACTGAAAATAAGAGTACAT10.9090909090909091No Hit
ACATTTGCCATTTTGGCCTTCTTTTCATTTCCACCTACTGTGAGCCCAGA10.9090909090909091No Hit
GTTTTGACGTTGCCCGTTAGAACTTAATCTTCTTTCTTGACTGATCATAC10.9090909090909091No Hit
GAGATCTGCATGGCCAGGGTTTGTATCAACTCTCCTCCTTATTTTAACTT10.9090909090909091No Hit
GTTGAATAGATCGCCAAAATCTGGTAAATCCTTGTTGATTCCAGCTTTAC10.9090909090909091No Hit
TATATAAATAAGACAGGGACATTTGAATTCACAGGCTTTTTTTATCGCTA10.9090909090909091No Hit
GTACAATGATGCTTATTGCTCGCAAATTAATCTTGACGCCAACAACCACA10.9090909090909091No Hit
AGACATGACCAAGGAATTCTTTGAAAACAAATCGGAAACATGGCCAATAG10.9090909090909091No Hit
GAACAATAGGGAAGAAAAAACAAAGACTGAATAAGAGAGGCTATCTAATA10.9090909090909091No Hit
CCATCTATAACAAGAGGACTTATATTATCAAATTTGTTCTTTGATGATTA10.9090909090909091No Hit
GTCCCTAAGTGCCTGAACAAAGAGAAGCAATTATATAGATAGAAAACCCC10.9090909090909091No Hit
ATTTAAAACAAAAGGGGTATAGAAGCCAAAATTACATCCTGATTTTTATG10.9090909090909091No Hit
CCCATAAACAGGTACAGTTGATTCGTAAGGACACTCACACTGTCCAAATA10.9090909090909091No Hit
AACATAGTCAACCCACATGAGAAAGGCATAAATACCCATTACCTCATGGC10.9090909090909091No Hit
GCATAAATGTTATTTGTTCGAAACTATTCTCTGTCGCTTTCAATCTGTGC10.9090909090909091No Hit
CCTATATGTGTATCTGTAGTCTTTGATGAACAATTGAAGAGCCATCTGGG10.9090909090909091No Hit
GTCCCCAGTGATTGTGAAAGAAATCTCTGTGTCTTGTGAATTAGTCATCA10.9090909090909091No Hit
ATTCCCATCACATTGTCGATGGATTCAATTCCCCAGTTCTGGAAAAGCAC10.9090909090909091No Hit
CAATAGGGCCAACCCGCGACTGACCCCCATGCACCACCGCGTGAGGCATT10.9090909090909091No Hit
ATATAAGAGTGCATGATGGGTATGAAGAATTCACAATGGTTGGGAGAAGC10.9090909090909091No Hit
GGTTTGTATCAACTCTCCTCCTTATTTTAACTTGATTTATGAAGTGGACA10.9090909090909091No Hit
GGAATGAACAAGGACAAACCCTCTGGAGCAAAACAACCGATGCTCGATCA10.9090909090909091No Hit
GACTCCACCCCAGATGTGCCTTCATCTGGATCTTCAGTCAATGCACCTGC10.9090909090909091No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers