HTGTLBGXG_n02_S2_R1_A06-FD.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HTGTLBGXG_n02_S2_R1_A06-FD.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1003832
Sequences flagged as poor quality	0
Sequence length	151
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TTCTTATACATGCCCTTAAGGACCATCTGAATGTGAAGACTCGAGAATTA	2657	0.2646857243044653	No Hit
GTATTTATGCTGTAAGATGTCTGGACTGGAAAGTACTAATCGGAGGGAAC	1630	0.16237776839152368	No Hit
TGTATATACAGCTCGCTGAAGAGGTCCATGACCTCAAAAAAGATCAAATG	1154	0.11495947529068609	No Hit
ACGTTATTGTATGTCTGTGGGTGTAAGCAGCTGTGCCAATCCTTCTGGAA	1133	0.11286749177153149	No Hit
GTATATACATACATATATACTTACACAGTTTGAGCATTCACAGGCCACTA	1132	0.11276787350871462	No Hit
CTTAAGGACCATCTGAATGTGAAGACTCGAGAATTATTTGCCGATGGATT	1071	0.10669115947688458	No Hit
GTACTAGTCCCTGCTGCGTCAGCCTACCCTACTGCCAGAGTAGTCTCTTC	1033	0.10290566548984292	No Hit
CTCTGAGTAAGATGCGCTAGAGAGGTTGGTATTTATGCTGTAAGATGTCT	1008	0.10041520891942077	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGGTCCG	25	9.3786506E-4	87.01891	145
AGCGAAA	390	0.0	68.834785	1
GGTCTAC	140	0.0	67.37304	1
TACCGTA	50	2.0234853E-4	57.92303	7
ATAGCTA	95	3.171226E-8	53.352818	6
GCGAAAG	535	0.0	50.148586	2
GGAACGC	65	7.3287374E-4	44.625088	145
TATACCG	65	7.382926E-4	44.5584	5
CAGCTCG	525	0.0	42.754845	9
ATACATG	1290	0.0	42.097324	6
GTCTACT	230	0.0	40.985123	2
TATACAG	625	0.0	39.389626	5
TACGGCT	260	0.0	38.99637	4
ATATACC	75	0.0014912733	38.624977	4
ACCGTAT	75	0.0014927344	38.61728	8
AGTACGG	280	0.0	36.256073	2
ACGTGCG	125	1.2766517E-5	34.75382	7
ACATGCC	1530	0.0	34.07407	8
ATACGGG	85	0.0027592257	34.074066	5
TATACGT	130	1.667049E-5	33.42546	4