FastQCFastQC Report
Fri 2 Oct 2020
HTGTLBGXG_n02_S2_R1_A05_FD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHTGTLBGXG_n02_S2_R1_A05_FD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGATCTAGAGTGATTCGACGTGGATGCATACCTAGATCTGTAACTCGTAT15.0No Hit
ATCAAAAAGTACACATCAGGAAGGCAAGAGAATAGCCCCGCACTCAGAAT15.0No Hit
TGCCTGATTAGTGGATTGGTGGTAGTAGCCATCTGTCTGTGAGACCGATG15.0No Hit
GCTTCATATAGCCCCCCAAGATCGAAGCTTACAGGTTCAAGTTTGTCCCG15.0No Hit
ACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGA15.0No Hit
TCAGAGAACTCTTCTTTCTTGATCCGTTCAGACTCGAAGTCGACCCTGGC15.0No Hit
GGCATCTCTCAGCTCAGTTTCCTCTCTGCTGACTCTTCTCTTAGGTACGC15.0No Hit
TACCAACCGTACGTCCCATTGCCCAATTAGCACATAAGCCATCTCTCCAT15.0No Hit
GCCTGAAATCCAAACCAGCGCTCCCAGAAAACCACCAACATTGTCTACCT15.0No Hit
GAAGAGAATACCGTTTGCCCCTTGATGCTCAAAGAGCTCTGCAGAAACCA15.0No Hit
TCTTAGTTTAGCAACTTAGGATTTCAAATGCCTGATTTTTGAGGGAAGGG15.0No Hit
GCAATGAGTCATGTCTCTGACACCAGGCTAAATGTATACTCATGAAAGTT15.0No Hit
CAACATATATTAACTATCGAAATACAACAACATAAAATCTGAGAAGAAAC15.0No Hit
CTACGTGCCCTTGCCCAATTAGCACATTAGCCTTCTCTCCTTTTGCAAGA15.0No Hit
CTCTACCATAAGCGACTGGAGTCAGTCCTGCAGTACAAACATTGTATCTT15.0No Hit
TTCTTGATCCGTCCAGACTCGAAGTCGACCCTGGCATCAATCCGGGCCCT15.0No Hit
CTTTGAAAGTGGGTTGGTATCTCTATTTCCTCTTTGTTCATTGGTTCCAT15.0No Hit
ATAATGTACAGTATGGATAGCAAATATGAGCATTCCCACAAGTAGTTCAG15.0No Hit
GGATAAGAGTCAGCAAAATGGGAGGAGATGAATACTCCCGCACGGAGACA15.0No Hit
GCAAATAGTAGCATTGCCACAACTACTTCAGTGCATGTGTGAGGAAGGAG15.0No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)