FastQCFastQC Report
Fri 2 Oct 2020
HTGTLBGXG_n02_S1_R2_H03_FD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHTGTLBGXG_n02_S1_R2_H03_FD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACAAGGAACAATCTGGGCACACATGAACACACCAGGTGGAGAAGTGAC14.761904761904762No Hit
CTTTCTTTACTCTTATGAAACTTGATACGCTTACATCTTCAAATGCAGCA14.761904761904762No Hit
GTTGGTTCTATTGGAAAATGAAAGAACTTTGGACTACCACGCATCAAATG14.761904761904762No Hit
GTGTATTTTTCATTAATTGTCGTACTCCTCTTCAGTGTCTCCGAAGAAAT14.761904761904762No Hit
GCAGGCAGCAGATCACATCGAGGTTGCTAGCCAGCCCAGGAAGATGCTGC14.761904761904762No Hit
CCTCTGCTCACTTCACCCCAGAAGCCAGGCCTCATACAATACAATCCTGT14.761904761904762No Hit
CTCAATTTATATTGTTAGTAAACTCGACACAGTCATTATTTCTGCTCTTC14.761904761904762No Hit
AAAAATGCCAGCACCATTAGAAGCAATCATCAACAGTCAGGCCACCCCGC14.761904761904762No Hit
CCCATATAAAAGAGAGTAGATTGAAATTTGATTAGGGAACTTGTCCTTTA14.761904761904762No Hit
ATTCTAAGTATTGCTCCAATAATGTTCTCAAACAAAATGGCGAGACTAGG14.761904761904762No Hit
GTCCATTTGTCCTTACAGACAAGAAAATGTGCATTTCCACCTGGCCTCGT14.761904761904762No Hit
TCCTATGACTCAGTGATGCTGTGCAATCTATTAGAAGAGGCATTATATTC14.761904761904762No Hit
CTTTTTTGGACAGTATGGATAGCAAATAGTAGCATTGCCACAACTACTTC14.761904761904762No Hit
GTTTCATTTGGCATATCCGCAAGCGATTTGCAGACAATGGATTGGGTGAT14.761904761904762No Hit
GGCTGGTTTGACTCACATTATGATCTGGCATTCCAATTTGAATGATACAA14.761904761904762No Hit
CTTCTTTACAATAATGTGGAATTTGAATCATTGAAGTCTTTAGTCCCTTA14.761904761904762No Hit
ATCTCCTGGTTGCCTTTCTGAGAATAGCTGTTGCTCTTCTCCCAACCATT14.761904761904762No Hit
ACCCAGAAGTTTCCTCATCACCATTGTTGGCTTGGCGCCAGCTTCGCCGT14.761904761904762No Hit
TTACTCATGTCAAAGGAGGGCACGATCGGGTTCGCTGCCCTTTCGTCCGA14.761904761904762No Hit
AGTGGATGTCTGTATTCTCAGATTTAATTTTGTTGTCCTATTCCAGAAAG14.761904761904762No Hit
ATTCTCTGTCGCTTTCAATCTGTGCCGCATTTCTTCAATTAACCACCTAA14.761904761904762No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)