FastQCFastQC Report
Fri 2 Oct 2020
HTGTLBGXG_n02_S1_R2_G12_FD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHTGTLBGXG_n02_S1_R2_G12_FD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21
Sequences flagged as poor quality0
Sequence length151
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGTTCTAGATGCTATGGCTTTCATTGAAGAATCCAACCCATGAATATTT14.761904761904762No Hit
CACTAAGACCACTGTGGCCCATATGGCCATAATCAAAAAGTGCACCTCAG14.761904761904762No Hit
AGATATGGCCCAGCATTAAGCATCAATGAACTGAGAAATCTTGCAAAAGG14.761904761904762No Hit
GGAATGTGTAGTGGCAGCGGCATCATATTCCAGGGTTGTGGCTGGCCCAT14.761904761904762No Hit
CTAGGGAGTCGACATATAAAGGGGGTAGCTGTCTGGAACCTGTCCTGCGA14.761904761904762No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG14.761904761904762No Hit
AGTCTGCTGTCGTGAGAGGATTTCTCATTTTGGGCAAAGAAGACAAGAGA14.761904761904762No Hit
GTATGCTAGAGTCCCGTTTTGTTTTGAGAACCACCACGACCTACCCTTTC14.761904761904762No Hit
CTACAGGACATTGAAAATGAAGAGAAGATCCCAAGGACAAAGAACATGAA14.761904761904762No Hit
GGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCGGGGG14.761904761904762No Hit
AACCATACATAATGCTATCCATCTGCTGAAGATACTCAAGCCCTCCGCGC14.761904761904762No Hit
AATGAAGTGGGAGCCAGAATACTAACATCGGAATCGCAATTAACGATAAC14.761904761904762No Hit
AAACAGCACCCCCCAATACTCAGAAAAGGGAAAGTGGACGACAAACACAG14.761904761904762No Hit
CTTCGAATATATGGAACAGCATCACTGAGTCCTGGGATTCTGATGGTCAT14.761904761904762No Hit
AGTTAAATTCATTATTTTTGCCGTCTGAGTTCTTCAATGGTGGAACAGAT14.761904761904762No Hit
GGCTAAAGAAAAGACCAATCTTGTCACCTCAGACTAAGGGAATTTTATGA14.761904761904762No Hit
AGCAGGTACTGATCCAAAAAGCAAGACTTTGAGCGACAAAGCTTCAATCC14.761904761904762No Hit
CAATTATCACATTAGCATTCTCTACATTAGCAAGAGTTCTCAGATAATTG14.761904761904762No Hit
GCCCACTGTGGACCATATGGCCATAATCAAAAAGTACCCATCAGGAAGTC14.761904761904762No Hit
ATGCAGTTGTGGATAATTTTACCATGGAGCTACACAGCATTGGAGTCTCT14.761904761904762No Hit
GATGTACCAGAAGTGCTGCAATCTAGTCGAGAAATTTTTCCCTAGCAGTT14.761904761904762No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)