FastQCFastQC Report
Fri 2 Oct 2020
HTGTLBGXG_n02_S1_R2_C11_FD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHTGTLBGXG_n02_S1_R2_C11_FD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2477
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGTAGAAACAAGGCATTTTTTCATGAAGGACAAGTTAAATTCATTATTTT100.4037141703673799No Hit
CTTTATGACTGACAAAGGGATTCAGGGGATTACAAAGTCTTCCCCGATAA80.3229713362939039No Hit
CCTATATGAACTGCTAGGGAAAAATTTCTCGAATAGATTGCAGCACTTCT80.3229713362939039No Hit
TCCTTAGACAGAATCCAACTGAGGAACAAGCCGTAGACATATGCAAGGCA70.28259991925716593No Hit
GATTAGAGGTTTCGTATACTTTGTTGAAACTTTAGCTAGGAGCATTTGCG60.24222850222042794No Hit
ATTATTGCCTCAGCAATTGACTGCTCGTCTCTCCCGCTTACTATCAACTG50.20185708518368994No Hit
GTGTCAAATGTCCCAAGCACATCCCGCATTTGCTGGAACAGTGTCCTTAC50.20185708518368994No Hit
CTTCATACCCTTCATGTACTCTTATTTTCAGTGTTTGGAGGTTGCCCGTT50.20185708518368994No Hit
CATTAAATACGATGACCAAAGATGCAGAGAGAGGCAAGTTAAAAAGAAGG50.20185708518368994No Hit
ATATAAACACTGCCTGTTCCGCCGGCTACTGGGAGAAACCTTGTTTTACG50.20185708518368994No Hit
ATATAGTGGTATTCCCTCCCCCTCGTGACTCGGGTCTTCAATACTTAATT50.20185708518368994No Hit
GACAATATACTGGTGGGATGGGCTCCAATCATCCGACGATTTTGCTCTCA50.20185708518368994No Hit
CCCCTATGGCACCTATATGTGTATCTGTAGTCTTTGATGAACAATTGAAG40.16148566814695195No Hit
GTTTGGAGGTTGCCCGTTAGCACTTCTTCTTCTTTCTTGACTGATGATCC40.16148566814695195No Hit
CTCCCAAGACCGTACTTAGCATGTTGAACATGCCCATCATCATCCCAGGA40.16148566814695195No Hit
ATCATAAGTCTGGCGACCTTGAGTTAGTTTATCTACCCTTGTTTGTTGAA40.16148566814695195No Hit
CAATAGTACGTTCCCTCTTTGATCTCTAACCCTTAAAAATCGGTCAATAC40.16148566814695195No Hit
CCCAAGGACAAAGAACATGAAGAGAACAAGCCAATTGAAGTGGGCACTCG40.16148566814695195No Hit
CTCTTATTTTCAGTGTTTGGAGGTTGCCCGTTAGCACTTCTTCTTCTTTC40.16148566814695195No Hit
GTTTTATATACCTTAGGGTAATGAACTGTACTTGTTGTTGGGCCATTCCT40.16148566814695195No Hit
GAACGATTCCTCTTGGGAATCCAGGAATGTGTAGTTGCAACGGCATCATA40.16148566814695195No Hit
GTGTTTATATTGAAGTGTTGCACTTAACCCAAGGGACGTGCTGGGAGCAG40.16148566814695195No Hit
ATATACGGAATCTTCACATTCCTGAAGTCTGCTTAAAATGGGAGCTAATG40.16148566814695195No Hit
GTCTGGGCTCCCAGTAGGGGGCAATGAAAAGAAGGCCAAACTGGCAAATG40.16148566814695195No Hit
GTCTAAGGATGTCCACCATCCTTACTCCTCCAATCTGTGTGCTGTGGCAC40.16148566814695195No Hit
GAATACTGACATCAGAGTCACAGCTGGCAATAACAAAAGAGAAGAAAGAA40.16148566814695195No Hit
TTATAGGTGCCATGCTCAGGATGTTTCTGAACCACTCGGGTTGATTTCTG40.16148566814695195No Hit
CCCTTATACTGGAGATCCTCCATACAGCCATGGAACAGGAACAGGATACA40.16148566814695195No Hit
GTGTAGTTGCAACGGCATCATATTCCATGCTTTTGGCTGGACCATGGGCT40.16148566814695195No Hit
CTATATGTGTATCTGTAGTCTTTGATGAACAATTGAAGAGCCATCTGGGC40.16148566814695195No Hit
GTTTCTAGCAGCGATAATCAAACTTTGGTCAACATCATCATTTCTCACTT40.16148566814695195No Hit
GACTAGCACTGACTCAGGGCCATTGATCTCCCACATCATTGATGACGAAT40.16148566814695195No Hit
GTATATGTAACACAACAGGGGTAGAGAAGCCTAAATTTCTTCCTGATTTG40.16148566814695195No Hit
AACTTATACAATATACGGAATCTTCACATTCCTGAAGTCTGCTTAAAATG30.12111425111021397No Hit
GAATGAAGTGGATGATGGCAATGAGATACCCAATTACAGCAGACAAGAGA30.12111425111021397No Hit
TGATTACATATATCACCAGAAATCAACCCGAGTGGTTCAGAAACATCCTG30.12111425111021397No Hit
ATATGATGCAATCAAATGCATGAAGACATTCTTTGGCTGGAAAGAGCCTA30.12111425111021397No Hit
GTTCTTTGCGTGACCATCTTCTTGGTCATGTTGTCTCTTACTCTCCTTTT30.12111425111021397No Hit
CACTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAG30.12111425111021397No Hit
GTTCATTACCCTAAGGTATATAAAACTTATTTCGAAAAGGTCGAAAGGTT30.12111425111021397No Hit
GAATAAGAGAGGCTATCTAATAAGAGCACTGACATTAAATACGATGACCA30.12111425111021397No Hit
AGACACCATGGCCTCCACCATGCTAGAAATTCCAACCGGTCTCCTATATG30.12111425111021397No Hit
GGATGTTTCTGAACCACTCGGGTTGATTTCTGGTGATATATGTAATCATC30.12111425111021397No Hit
ACACTAAGTGGAATGAAAATCAAAATCCTCGAATGTTCCTGGCGATGATT30.12111425111021397No Hit
GTTGTAAGGCTTGCATAAATGTTATTTGTTCGAAACTATTCTCTGTCGCT30.12111425111021397No Hit
GTTTTATTATTTGGACAGTGTCAAATGTCCCAAGCACATCCCGCATTTGC30.12111425111021397No Hit
CCCCAGCTCAACCCGATTGATGGACCACTACCTGAGGATAATGAACCAAG30.12111425111021397No Hit
GTACACATCAGGAAGGCAAGAGAAGAACCCCGCACTCAGAATGAAGTGGA30.12111425111021397No Hit
GTGTTGTCCCCAGTGATTGTGAAAGAAATCTCTGTGTCTTGTGAATTAGT30.12111425111021397No Hit
CAATTACAACAAGGCAACCAAACGACTTACAGTTCTTGGAAAGGATGCAG30.12111425111021397No Hit
GAAGAGAACAAGCCAATTGAAGTGGGCACTCGGTGAAAATATGGCACCAG30.12111425111021397No Hit
CCCTTGATGGTGGCGTACATGCTAGAAAGAGAATTGGTCCGTAAAACAAG30.12111425111021397No Hit
ATCCTACTCTGTTCTGGTGGGGCAGCAGCAAAGGGGAGAAGTTTTATTAT30.12111425111021397No Hit
CTTCAGGAATGTGAAGATTCCGTATATTGTATAAGTTTGGTCCTCCATCT30.12111425111021397No Hit
CGTAAGGACACTGTTCCAGCAAATGCGGGATGTGCTTGGGACATTTGACA30.12111425111021397No Hit
CATTTGGAAGTTTGTTTCATGTATTCGGATTTCCATTTCATCGACGAACG30.12111425111021397No Hit
GAGTGGTAGTGAGTATTGACCGATTTTTAAGGGTTAGAGATCAAAGAGGG30.12111425111021397No Hit
GTGTTTGGAGGTTGCCCGTTAGCACTTCTTCTTCTTTCTTGACTGATGAT30.12111425111021397No Hit
GACTGAAATGGTTCAAATTCCATTTTGTTGTATAACATTGTGGGATCTTG30.12111425111021397No Hit
ATTGATAAGTGTTGACTAGCACTGACTCAGGGCCATTGATCTCCCACATC30.12111425111021397No Hit
CTATGGATTTGTGGCTAATTTTAGCATGGAGCTACCCAGCTTTGGAGTGT30.12111425111021397No Hit
CACATATAGGTGCCATAGGGGAGACACACAAATTCAGACGAGAAGATCAT30.12111425111021397No Hit
GAGTTGATACAAACCCTGGCCATGCAGATCTCAGTGCCAAGGAGGCACAG30.12111425111021397No Hit
CAGTAAACAGAACACACCAATACTCAGAAAAGGGAAAGTGGACGACAAAC30.12111425111021397No Hit
GATCAGGGTTGAGGATACTGGTAAGAGGCAATTCTCCAGTATTCAATTAC30.12111425111021397No Hit
AATGAAGGGAGTGTACATAAATACGGCCTTGCTCAATGCATCCTGTGCAG30.12111425111021397No Hit
GTCATGTTGTCTCTTACTCTCCTTTTTCTTTGAAAGTGGGTTGTTATCTC30.12111425111021397No Hit
GTTCTAGAGGCTATGGCTTTCCTTGAAGAATCCCACCCAGGAATATTTGA30.12111425111021397No Hit
AGTTGATACAAACCCTGGCCATGCAGATCTCAGTGCCAAGGAGGCACAGG30.12111425111021397No Hit
CCACTATATGATGCAATCAAATGCATGAAGACATTCTTTGGCTGGAAAGA30.12111425111021397No Hit
GGATGTGATTATGGAAGTTGTTTTCCCAAATGAAGTGGGGGCAAGAATAC30.12111425111021397No Hit
GTCTTGGTGTATTTCTTTTGTCCAAGATTCAGTATCGAGACTCCCAAGAC30.12111425111021397No Hit
TAATAAAACTTCTCCCCTTTGCTGCTGCCCCACCAGAACAGAGTAGGATG30.12111425111021397No Hit
GGATACTGGTAAGAGGCAATTCTCCAGTATTCAATTACAACAAGGCAACC30.12111425111021397No Hit
AACAGACTGTGTTCTAGAGGCTATGGCTTTCCTTGAAGAATCCCACCCAG30.12111425111021397No Hit
TTCGTATACTTTGTTGAAACTTTAGCTAGGAGCATTTGCGAAAAGCTTGA30.12111425111021397No Hit
AATAAGAGCACTGACATTAAATACGATGACCAAAGATGCAGAGAGAGGCA30.12111425111021397No Hit
CCCTTGGGTTAAGTGCAACACTTCAATATAAACACTGCCTGTTCCGCCGG30.12111425111021397No Hit
CTCCTATATGAACTGCTAGGGAAAAATTTCTCGAATAGATTGCAGCACTT30.12111425111021397No Hit
GGGTTAAGTGCAACACTTCAATATAAACACTGCCTGTTCCGCCGGCTACT30.12111425111021397No Hit
CTTCTATGGTGTTGGCCAATGCAGTTGCTGCCGGTTGATTTCTGTTTAAT30.12111425111021397No Hit
GTACTTAGCATGTTGAACATGCCCATCATCATCCCAGGACTCAGTGATGC30.12111425111021397No Hit
GTATATTGTCTTGGTGTATTTCTTTTGTCCAAGATTCAGTATCGAGACTC30.12111425111021397No Hit
TCACAAGACACAGAGATTTCTTTCACAATCACTGGGGACAACACTAAGTG30.12111425111021397No Hit
ACCCTGATCCTCTCACATTCACAGTCAATGAGGAAAATTGCATCCTACTC30.12111425111021397No Hit
GTTATACAACAAAATGGAATTTGAACCATTTCAGTCTCTTGTCCCTAAGG30.12111425111021397No Hit
GTTCATTGATGCTTAATGCTGGGCCATATCTCTTGTCTTCTTTGCCCAAA30.12111425111021397No Hit
GATCGGAATACTGCCCGACATGACCCCAAGCACGGAGATGTCGCTGAGAG30.12111425111021397No Hit
CTACTGGGAGCCCAGACTGTTCAAGCTTTTCGCAAATGCTCCTAGCTAAA30.12111425111021397No Hit
CCATAGAAGTCTTTAGATCGAATGGCCTAACAGCTAATGAGTCAGGAAGG30.12111425111021397No Hit
ACCCTGGCATCAATCCGGGCCCTAGACACCATGGCCTCCACCATGCTAGA30.12111425111021397No Hit
ATTTTAACTTGATTTCTGAAGTGGACAGGGCCGAAGGTACCATGTTTCAA30.12111425111021397No Hit
TATTTGGACAGTGTCAAATGTCCCAAGCACATCCCGCATTTGCTGGAACA30.12111425111021397No Hit
CTTTGTAATCCCCTGAATCCCTTTGTCAGTCATAAAGAGATTGATTCTGT30.12111425111021397No Hit
GTCCAGACTCGAAGTCGACCCTGGCATCAATCCGGGCCCTAGACACCATG30.12111425111021397No Hit
CTTCTAATAGATGGCACAGCATCACTGAGTCCTGGGATGATGATGGGCAT30.12111425111021397No Hit
ATCATGCTCTCAATCTGCTGAAGAGACTGAAGAAGGCAGCGCCTCATTTC30.12111425111021397No Hit
CTATTAGAAGAGGCCTTATTTTCTCAATTTTCTTCTTTGTTGATTCATTG30.12111425111021397No Hit
CAATAAGGCATGTGAATTGACTGATTCAAGCTGGATAGAACTTGATGAAA30.12111425111021397No Hit
CATCAGGAAGGCAAGAGAAGAACCCCGCACTCAGAATGAAGTGGATGATG30.12111425111021397No Hit
GAATAATGGACATGATTCCAGAGAGGAATGAACAAGGACAAACCCTCTGG30.12111425111021397No Hit
TGCACAAACAGACTGTGTTCTAGAGGCTATGGCTTTCCTTGAAGAATCCC30.12111425111021397No Hit
TCGGAATACTGCCCGACATGACCCCAAGCACGGAGATGTCGCTGAGAGGG30.12111425111021397No Hit
CTTTATCACTGTTACTCCAATACTCATGTCAGCTGATTCATTTACTCCAG30.12111425111021397No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers