FastQCFastQC Report
Fri 2 Oct 2020
HTGTLBGXG_n02_S1_R1_H08_FD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHTGTLBGXG_n02_S1_R1_H08_FD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8
Sequences flagged as poor quality0
Sequence length151
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGTGTAAACCAGGCGACACTAAGGGATGGCCCTCCGAATGCGTGTGGTC112.5No Hit
ACATAATGCACTCCAACACCATGTCACGCTTTCAGGTAGACTGTATCCTT112.5No Hit
CTCCTATATGAACTGCTAGGGAAAAATTTCTCGAATAGATTGCAGCACTT112.5No Hit
ATCTGATACCGATGGGGTGCTCTTTGTAAGTATAGATTTGTCAATCACTG112.5No Hit
GACTGAATAAGACAGGCTATCTAATAAGCGCACTGAGATTAAATACGATG112.5No Hit
GGAGATCCTCCATCCCGCCTTGGAGCAGGGACAGGATCCACCATGGACCC112.5No Hit
CCATAAGCTACCAGGTTAGGCAGAGGTCAGGAATGTGATGATTCCGTATA112.5No Hit
TGGCGAGGGCTGTGCGTGAGGAGTCGGCGTCACGCCTGCGCTCACGCGGC112.5No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)