FastQCFastQC Report
Fri 2 Oct 2020
HTGTLBGXG_n02_S1_R1_G09_FD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHTGTLBGXG_n02_S1_R1_G09_FD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences124
Sequences flagged as poor quality0
Sequence length151
%GC46

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG21.6129032258064515No Hit
GGATTCGTAAGGACACTGTTCCCGCAAATGCGGGATGTGCTTGGGACATT10.8064516129032258No Hit
TGTGATCATGGACTGGAATACAACATTGTTAGGACAACAACTCTGCTCAA10.8064516129032258No Hit
GCCTAAGGCAATCGCTAGATAGTAGCCTGGGATTCCGACCCAGCTTTGTT10.8064516129032258No Hit
AGATTAAGTTGTTTATGGGCCTACAAACACATTCCCTTCTGTTAAATAGA10.8064516129032258No Hit
TCTTCTACCTGTATTAAATCCATACAAGTACTAACAAGGCACGACCCTGC10.8064516129032258No Hit
GTGCTGGAGTATTCATCTACTCCCATTTTGCTGACTCTTATCCCTCTCAG10.8064516129032258No Hit
TTGATGCTTAATGCTGGGCCATATCTCTTGTCTTCTTTGCCCAAAATGAG10.8064516129032258No Hit
ACATGGAAGAGTCCGTCTCGTGCGTGTCCATTGGGGTCCTAGACATATTA10.8064516129032258No Hit
GCTAAGTACGGTCTTGGGAGTCTCGATACTGAATCTTGGACAAAAGAAAT10.8064516129032258No Hit
ATAAACACCTGGAGGACAGAGGGTAAATCCAAGTTTATGTTTCATAAGGA10.8064516129032258No Hit
GTTGATCACAGCTCCACAAAGTACACAGAGAAGGCTCTCCGCATGTACGT10.8064516129032258No Hit
GCAGCATGGGGTTCAGTCGCTGGTATGACCTAGAGACAAAGATCAGCTCG10.8064516129032258No Hit
GGTCGGTTTAGTGGTACTTTCTCAGACCTCGTTTTACTTGTGCTTACAGC10.8064516129032258No Hit
GGAATGTAAATCTAACGAATTCTCACAAGACCCGGGAATGAGGAATCAGC10.8064516129032258No Hit
ACAAGGGTGTTTTTTATCATTAAATAAGCTGAAACGAAAACGTTCTTATT10.8064516129032258No Hit
GGGAGACACGTCAGATCCCCATAGAGGTTTAGGGGGGACATCCAGCCCAG10.8064516129032258No Hit
GTGCATTGACTGAAGATCCAGATGAAGGCACATCTGGGGTGGAGTCTGCT10.8064516129032258No Hit
GTTGAACTTGGTGTCAGAGTCGGCGGCTAAGAGGCGGCCGCGGGCGTGGC10.8064516129032258No Hit
GTCTGGGCTCCGAGTAGGGGGCAATGAAAAGAGGGCCAAACTGGCAAATG10.8064516129032258No Hit
CAGAATGGTGCTGGCTAGCACTACGGCAAAGGCTATGGAACAGATGGCTG10.8064516129032258No Hit
GTACTTACAAGGGGGACGATATCCAATAGACGAGTAGAAATTCGTTCAAA10.8064516129032258No Hit
CCCTAGGACATCTGGAGCTGCTGGCGCTGCAGTCAAAGGAGTTGGAACAA10.8064516129032258No Hit
GTCTGGGCTCCCAGTAGGGGGCAATGAAAAGAAGGCCAATCTGGCAAATG10.8064516129032258No Hit
GCTGTTTGCACTTGGCTAGCAGGGTCTGGCTCGTGGCATGGGGAAAGTTG10.8064516129032258No Hit
CAAGTGTAGTGCAAAATATAGTCACACAAGATGTTAGGTTCATGAAGCCA10.8064516129032258No Hit
GACCTGAAGTACTACAATTAATCAACAAACAAGAAAAGTGAGAAAATAAG10.8064516129032258No Hit
GGCTAGAGGAATTCTGATATATCCAAGAAGCACTGCATAGGGTGCTTTGA10.8064516129032258No Hit
GATGTTATGGAATCAATTAAGAAAGAGGAAATAGAGATAACATCCCACTT10.8064516129032258No Hit
GGCAGGAAGGCTAATAGATTTCTTAAAGGATGTAATGGAATCAATGAACA10.8064516129032258No Hit
GTGTGCAGCCTACATTCTCAGTGCAGCGGAATCTCCCTTTTGAAAGAGCA10.8064516129032258No Hit
GTGCTGGAGTAGTCATCTACTCCCATTTTGCTGACTCTTATCCCTCTCAG10.8064516129032258No Hit
GGTAATTACGGGGTAAGTGACATCGTACGTGGAAGAGTAAGGTAGAAACA10.8064516129032258No Hit
GTTATCGTTAATTGCGATTCCGATGTTAGTATTCTGGCTCCCACTTCATT10.8064516129032258No Hit
CTCTTGTGGAAAGCTTTCCTCTTGGAATCACTTTCTTTCCTCTTATGAAA10.8064516129032258No Hit
GACTTCTGCCATATGTAGAAAGATTAAAAACTGTTAGCCCTTTTTTTTTT10.8064516129032258No Hit
CTTCTGGTACATCTGGTCCTCCTCAAGAATTGCCCTTGGGCTAGTGTTGA10.8064516129032258No Hit
CAATAACAGCACACCCATCTGTCTTTCTTAGACATCAGGAGCAGATCAGT10.8064516129032258No Hit
CAAGTACAGTTCATTACCCTAAGCTATATAAAACTAATTTCGAAAAGGTC10.8064516129032258No Hit
ATCCTCAACCCTATTGCTGCCTTGCATATGTCTACGGCTTGTTCCTCAGT10.8064516129032258No Hit
TCCCAGGTGTTGCGATAGCCCTTCTTTTTAACTTGCCTCTCTCTGCATCT10.8064516129032258No Hit
CTACTTTGCTTTGGTGGAGCGGCTGCAAAGGGAAGAAGTTTTATTATCTG10.8064516129032258No Hit
CAAAATAAAATCTGAGAAGACACACATTCCCATCTTTTAATTCACTGGAG10.8064516129032258No Hit
GATTTATACCTTCTCTCTCTCTCTCTCATACACACACACAAACTGTTCAA10.8064516129032258No Hit
GCCAACCGCTTGGGTCATACCCACAGGTAAAGGGACAGATAACTATACTT10.8064516129032258No Hit
TCTCCCAACCATTGTGAATTCTTCATACCCTTCATGTACTCTTATTTTCA10.8064516129032258No Hit
AGCTGCCTCGTTTTCTTCATGTTTTTAGTTCTTGGAATCTGCTCCTCACT10.8064516129032258No Hit
CCTCAAGAATGGTTCAATTTTGGCGTTCACTTCTTTTGACATTTGGGAAA10.8064516129032258No Hit
GAGAAGAACCCCGCACTCAGAATGAAGTGGATGATGGCAATGAGATACCC10.8064516129032258No Hit
GCTGCACAAAGAGCAATGATGTATCAAGTGAGAGAAAGCCGAAACCCAGG10.8064516129032258No Hit
AGTAATTCCTTCTCATGCTTGCAATCTGTTCAATTGCACATACATCTTCA10.8064516129032258No Hit
ATCTAATGTCGCAGTCCCGCACTCGCGCGCTCCTCACTAAGACCACTGTG10.8064516129032258No Hit
TGTTATTTGTTCGAAACTATTCTCTGTCGCTTTCAATCTGTGCCGCATTT10.8064516129032258No Hit
TTTGGATGGAAAGAACACTCTTTTGTCACCCCACACGGAAAGGTAATAAC10.8064516129032258No Hit
ATTGATGCCTTTGAGGTGATGATTCCTGACCCAAAGCCTCTACTCAGTGC10.8064516129032258No Hit
GATCTGGAGCTGCTGGCGCTGCAGTCAAAGGAGTTGGAACAATGGTGTTG10.8064516129032258No Hit
GAGAGAGATTGGGGGAAGCAGGCTCCCCGCCAAGCAGAGAGTCCGATGCT10.8064516129032258No Hit
GTGCCTTCTGTGCCCTCACCCAAAAAACTAAGCCTAGCTTGTGTTCTCAG10.8064516129032258No Hit
GCTTAACAATAGAGAGAATGGTGCTATCTGCTTTTGAAGAGAGGAGGAAT10.8064516129032258No Hit
TTGGCATAGTTGATGCAGAACTGCTCGAAACTGTTCCTCTCGAAGTCTTC10.8064516129032258No Hit
GCCAAAAGCATGGAATATGATGCCGTTGCAACTACACATTCCTGGATTCC10.8064516129032258No Hit
CTGCACATTTGAGTCATGAAAATCCAAAGTCATTTCATTTTCCAGTAGAC10.8064516129032258No Hit
GTGAAAACGTCACTTAATATATTAGGGAACTTCTAATCCCACAGAACATA10.8064516129032258No Hit
TTTCTCACAGGCTTCCAAATGCTGGCCACGCGCTGGGGAGAAGCCGTTCG10.8064516129032258No Hit
ATGTGGGACTTGATCCCAGGACCCTGAGATCACGACCTGAGCTGAAGGCA10.8064516129032258No Hit
GTCCCACGTTTGAGGGCAAAAGGTGACAGAGGCCGTGAGCAGAGAGCTAA10.8064516129032258No Hit
CCGTTAGCTTTGTGGTAACCAATTGTTTCCAGTACACAACAGCGCATAAC10.8064516129032258No Hit
TCCCTCCCCATCTGGAATCGGGGATTAACTACGTAATTTAAGAGCAGAAA10.8064516129032258No Hit
GAAGTGGGGAATTGAATCCATCGACAATGTGATGGGAATGATCGGAATAC10.8064516129032258No Hit
ACCCCCCGCCTCCCATTTCAGAATATACATCCGATCACAATTGGAAAATG10.8064516129032258No Hit
CAGTAGTACATTTCCTCTTTGGTCCCGAACTCTCAAAAACCGGTCAATGC10.8064516129032258No Hit
CAGATGGAATCACCTCTCGCCCTACCATGCTGGAATACGATTGACCCACC10.8064516129032258No Hit
ATGATAAAATGTCTCAAGCATTATACTTCAACAGGATTCTGAGACTCCCC10.8064516129032258No Hit
CTAGGATCTACCCTCTTAGCAAATTTCAAGAAAATAATAACAGTATTAGT10.8064516129032258No Hit
CTTCATTAGGGAGTCAGTTGCCCTGCAGTGGGACCCTTGGGCTGTACAAT10.8064516129032258No Hit
TAATATTAGAGTTTCCAGCAGGTCAGAAATCACACTGAAGTTCGCTTTCA10.8064516129032258No Hit
ATTAACTTTGACTCTACTTCTCTCTATCTGCCATTCCTTTCTCCGTCTTT10.8064516129032258No Hit
CTGTGGCACATTTCCAAGAGAGATGCTAATGGGTCTGCTGACACTGCTGC10.8064516129032258No Hit
CAAAATTTACTCGCACCATAATAAAATTGACATCTTAACTGAATGCAAAA10.8064516129032258No Hit
GTGCCAATCAGAACCTGGGTGGCAGGGTGATTGACAGCCAGCCCCCGAAG10.8064516129032258No Hit
TCTAAGCAGCATATTACTATGGGAACTTCCAGGAGAAATAGTGGTAATCA10.8064516129032258No Hit
GCACAAAGTCCATAGAGTAATTTTCCCTCCTAGCGTAACCATTTTTAAAA10.8064516129032258No Hit
ATACCATAGTATCAATGATTTCATTTGAATCAATTTGTACTCCTCTACTG10.8064516129032258No Hit
GTTTTAGTACTGAGGATAGTCAGAAAAGAGCCAGTCAAGCACGTGTAAGC10.8064516129032258No Hit
GAATAAGAGATGGTATCTAATAAGAGCACTGACATTAAATAAGATGCCCA10.8064516129032258No Hit
GTTGTTTTCCCAAATGAAGTGGGGGCATGATTACTGCCATCAGAGTCACA10.8064516129032258No Hit
CAGTTTCTGTTGTTTTTACTCAAATACAGCATCTATTGATGACTGTCACT10.8064516129032258No Hit
GTATTAAGTAGCCCTGCAGTGGGAGACTTATGCTGTAATATAGTTCCTCC10.8064516129032258No Hit
GCACAACACTTAGTGGAATGAAAATCAAAATCCTCGAATGTTCCTGGCGA10.8064516129032258No Hit
ATCCGCCAGCGATTTGCAGACAATGGCTTGGGTGATGCCCCATTCCTTGA10.8064516129032258No Hit
GGCGGGTGGGGGGGGGGGGGGGGGGGGGGCGGGCGGGGGGGGGGGGGGGG10.8064516129032258No Hit
CACATATACACAGAATGTGGCTTAAACATGGGATCATAGGTCTAAGCGGG10.8064516129032258No Hit
CTGTCTGGCTGTCAGTAAGTATGCTAGAGTCCCGGTTTCGGTTCATTACC10.8064516129032258No Hit
CTTTATGACTGACAAAGGGATTCAGGGGATTACAAAGTCTTCCCCGATAA10.8064516129032258No Hit
CTTGGTAAAGACAGTTTGTTCTCGGTGGTGGTGGCGGGGCCACTAAACAG10.8064516129032258No Hit
ATCTAAACCCATTTTGCTGACTCTCACTCATCTCATTGACATTTCGGTGA10.8064516129032258No Hit
CTATAAATGGTATAAAGTAGGTATACCTATATCTATAATCTTTTGCCATC10.8064516129032258No Hit
GAGTTAAACGATGTGCTTAAGGTCACGTTTAGCGAGGCTCACGTGACAAT10.8064516129032258No Hit
CAGTATTGAAAAGTTAAATACTACAATTTAACTACCGATTCTTACAAATA10.8064516129032258No Hit
GCTAAAGACAAGACCGATCCTGTCACCTCTGACTAAGGGGATTTTAGGAT10.8064516129032258No Hit
CTCTGCTTCACTGCAGGAGAAAACAGAGAGGAGACACGGCCCTCCGAGTG10.8064516129032258No Hit
GGGTACATGTTCGAGAGTAAAAGAATGAAGATTCGAACACAAATACCAGC10.8064516129032258No Hit
ATCGGGTTGAGCTGGGGTGCACCAGTCTCTGTGTTTGTCGTCCACTTTCC10.8064516129032258No Hit
CTCTTATTCAGTCTTTGTTTTTTCTTCCCTATTGTTCTTTGCGTGACCAT10.8064516129032258No Hit
CTGCATAGATAGATCAGTTAGAAGCTAAAGCACTGTGTCGGAAATGTGGA10.8064516129032258No Hit
CAAAAGAGAAATAACGTTCCATGGGGCCAAGGAGGTGTCACTAAGCTATT10.8064516129032258No Hit
ACTCAGAAAAGGGAAAGTGGACGACAAACACAGAGACTGGTGCACCCCAG10.8064516129032258No Hit
GCATCAACTATGCCAACGAGCAGCTTCAGTATTATTTCAACCAGCACATT10.8064516129032258No Hit
GGACAAGTTAAATTCATTATTTTTGCCGTCTGAGTTCTTCAATGGTGGAA10.8064516129032258No Hit
ATATAATTCCAGCCTCATAATGAAAATACACCAGAGGCAATCATGGACCG10.8064516129032258No Hit
GGGGGGGGGGGGGGGGGGTGGGGGGGCGGGGCGCGGGGGGGGAGGGGGGG10.8064516129032258No Hit
GGGAGAAGCAGGCTTCCCGCTGAGCAGGGAGCCTGATGCAGGGCTCGATC10.8064516129032258No Hit
GAAGGGGTGTGGACTGGAATGATAGATGGATGGTATGGTTATCATCATCA10.8064516129032258No Hit
GCCAAGTGTCGAGGCCCATGTTCCTATATGTGAGAAGCAATGGAACATAC10.8064516129032258No Hit
GTATATTGTCTTGGTGTATTTCTTTTGTCCAAGATTCAGTATCGAGACTC10.8064516129032258No Hit
ATTACATAGTATGTACTATGTATTACATAGTAAAAGAACCAAACTCTAAA10.8064516129032258No Hit
GTGAAAGATATCCCATATTAACTACTAGTACAAACTATAATATATCATTC10.8064516129032258No Hit
TTACTGGACTTGGTATACGAATGTTTTAAAAGTCCTTGTGTGATAATACT10.8064516129032258No Hit
GAACAGTGACAAGTACTGTTCACTACCCAAATATCTACAAAACTTATTTT10.8064516129032258No Hit
TCGCAGGACTCAGTGATGCTGTGCCATCTATTAGAAGAGGCCTTATTTTC10.8064516129032258No Hit
GAACACACCAATACTCAGAAAAGGGAAAGTGGACGACAAACACAGAGACT10.8064516129032258No Hit
CAGTTCAGTGATGCTTAATGCTGGGCCATATCTATTGTCTTCTTTGCCCA10.8064516129032258No Hit
CCTGATCTGGGGTCAGCTGTGCTGCCTCCAAACTGGTGGTTCTTTGAAAG10.8064516129032258No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers