FastQCFastQC Report
Fri 2 Oct 2020
HTGTLBGXG_n02_S1_R1_F09_FD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHTGTLBGXG_n02_S1_R1_F09_FD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences105
Sequences flagged as poor quality0
Sequence length151
%GC46

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTCAACCCTGATCCTCTGACATTCACAGTCAATGAGGAAAATTGCATCC10.9523809523809524No Hit
TGAGAAAGTAGGGGAATGAAAGAGAAAATAGAATCAAAACACCGTGGTGA10.9523809523809524No Hit
AGAAGAAGTGCTACCGGGCTCCCTCCAAACACTGAAAATAAGAGTACATG10.9523809523809524No Hit
ATATTCTATAATGTATAAGTAAAAATTTATGTACAGTTTTAGGATGTTGT10.9523809523809524No Hit
AGTCAACACTTATCAATGGATAATCAGGAACTGGGAAATTGTGAAAATTC10.9523809523809524No Hit
CTTCATTTGGGAAAACAACTTCCATAATCACATCCTGTGCCTCCTTGGCA10.9523809523809524No Hit
AATGCACTGTACTTGTTGTTGGGCGATTCCTATTCCCGCAGGGTACGGCC10.9523809523809524No Hit
ATGTGATGGGAATGATCGGAATACTGCCCGACATGACCCCAAGCACGGAG10.9523809523809524No Hit
CAAGGGAGCTTAATGTGGGCCAGTGCCGATGGAGGAGGGCAAGGGTTAGG10.9523809523809524No Hit
TTCTACACCTGTGTTCATAGGAGCATTATTAACAATAACCAAAAGGTGGG10.9523809523809524No Hit
GAAGACCTTGGGCACAATTATTGCCTCAGCAATTGACTGGGCGTCTCTCC10.9523809523809524No Hit
GAGGAGGGCGGTCGACAGGGGGGGGGGCGATTGGGTGGGATGGGGGTGGG10.9523809523809524No Hit
GAGGTGGTTGCCGATGCTGCACTTCTGCACGGCGATGGCGCGGGATGCCA10.9523809523809524No Hit
CTATAGTACCTTGCAGCTTACAGATGACAGGCAGGACATGTTAGGTATAA10.9523809523809524No Hit
TTAAAAGAACACTGCATGTAAATTATAATTTCGAAAACCATCGAAACAGA10.9523809523809524No Hit
GTCCACATATATTACCTAGAGAAAGCCAACAAAATAAAATCTGAGAAGAC10.9523809523809524No Hit
ATTCCAGGACCCTTGGATCAGGATCTGACTTGAGTAAGACACTTAACAAC10.9523809523809524No Hit
CTACTGGGAGCCCAGACTGTTCAAGCTTTTCGCAAATGCTGCTAGCTAAA10.9523809523809524No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10.9523809523809524No Hit
GTATTAGTCAGTATTTGGTTGTTCTTCCCTATGGTTGTTGGGGTGACGAT10.9523809523809524No Hit
GTTGAAACATGGTACCTTCGGCCCTGTCCACTTCAGAAATCAAGTTAAAA10.9523809523809524No Hit
AGCGAAAGCAGGTGCCCCATTTCCTTCTGGCCCCACCACTGGCTATCCTG10.9523809523809524No Hit
GTTCTGCAAACTCCAGTCACCTTGGCTGATATTCAGCCAGCATCCCGTGC10.9523809523809524No Hit
TTTTTACCACATACTGGCCCTTGAAAGTCGCTGGCCTGTGACAGCAAGTC10.9523809523809524No Hit
GTTATTGGACTCGCGCCCGGAATTGGAAAAGTGATTGGGCCCGGAATTAC10.9523809523809524No Hit
GTACTTGTTGTTGGGCCATTCCTATTCCACCATGTTACGGCCAGAGGTGA10.9523809523809524No Hit
CCAAACACTGAAAATAAGAGTACATGAAGGGTATGAAGAATTCACAATGG10.9523809523809524No Hit
GACCTCCAGCCTGCTGCAGGTGCGGCTTGCCACGGGATCCCTGTGGCCTC10.9523809523809524No Hit
GTTTACAGAATCAATCTCTTTATGACTGACAAAGGGATTCAGGGGATTAC10.9523809523809524No Hit
CAGATAAAAGCCACATCGGAAAGCTCGGTGACTTTACCGTTGTCTGCAAA10.9523809523809524No Hit
CTCCCAGAGCCTGGCACTGAGGAGCTGATAGTGGGCCATAGGGGCCCGGA10.9523809523809524No Hit
ATTCCATGCTTTTGGCTGGACCATGGGCTGGCATTACCACAGCATTGTTT10.9523809523809524No Hit
CCTTAGCACAGCAAATCGCTGATAAAAATAAAATTAATGGAGAACCCAGC10.9523809523809524No Hit
CTCTTATTTTCAGTGTTTGGAGGTTGCCCGTTAGCACTTCTTCTTCTTTC10.9523809523809524No Hit
GTCTCCAGGACCTTGAGGGGCTAGCTGGTGTCTGAGGAAAAGTTTATTCA10.9523809523809524No Hit
CTACCCGTAGATCAAGGGGGCGCAGCTCTGGGGTTTCTGGGACTGCCAGT10.9523809523809524No Hit
AATGAAGATTGCCCAAGGAATGGGACTGATTGACTCAAGGTAACCCAAGA10.9523809523809524No Hit
AAAAAGTCATGATCACTGGTGGACTGAGTGTATAAGCAGTGATTATTTCT10.9523809523809524No Hit
GAATTGACCTCTTTCTTATTACATAATGAACTTTGTCTCCTGTTACAGTT10.9523809523809524No Hit
CTCATTAGCTGTTAGGCCATTCGATCTAAAGACATCTATGGTGTTGGCCA10.9523809523809524No Hit
TGGGAATCCAGGAATGTGTAGTTGCAACGGCATCATATTCCATGCTTTTG10.9523809523809524No Hit
GCTTGTTTTCATGATGCCCAAGTTATGGTGTTTAGGTTTGGCTTCTTAGT10.9523809523809524No Hit
TTATGGAAGTTGTTTTCCCAAATGATGTGGGGGCAAGCATACTGACATCA10.9523809523809524No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGG10.9523809523809524No Hit
AGGCTATCTAATAAGCGCACTGACATTACATACGATGGCCAAAGATGGAG10.9523809523809524No Hit
GTTAGGGGCGATCTGAACTTTGTCAATAGGGCAAACCAGCGACTGAACCC10.9523809523809524No Hit
GAAATAAAGTATTGAAGACCCGACTAACGAGGGGGACCGAAAACCACTAT10.9523809523809524No Hit
ATGACATCGTTAACTTCTTTATTTGAATGATTCACTGCAGGGAATCAACT10.9523809523809524No Hit
GTCAGCTAACTGTGCTGTTTCATTTTGATGCATTTACAACATGGAGGTAC10.9523809523809524No Hit
GTCATTATTCAGATATTAGACAATGTAAAGATTTCACAGCCCTTATTTAA10.9523809523809524No Hit
GCTTAATGCTGGGCCATATCTCTTGTCTTCTTTGCCCAAAATGAGAAATC10.9523809523809524No Hit
GCTCGCCGCTACCTGCCTTGATCATGCTCTCCTCCTGTGAGAATGCCATG10.9523809523809524No Hit
ATCTAATGTCGCAGTCCCGCACTCGCGAGATACTCACTAAGACCACTGTG10.9523809523809524No Hit
CCTTACTCCTCCAATCTGTGTGCTGTGGCACATTTCCAAGAGAGATGCTA10.9523809523809524No Hit
CCTATCTCTTCATTCTCAGCAGCCACAGCTGCAGGCTTGGCCTGGGAGGC10.9523809523809524No Hit
CTGGCTGAACAGGGAGGCCATTATGGGTGCATGAGTACGATGGTCTGGCT10.9523809523809524No Hit
GGTTGAAACATGGTACCTTCGGCCCTGTCCACTTCAGAAATCAAGTTAAA10.9523809523809524No Hit
CCGGTCAAGATGTCAGGTAGACAGTTACCTTTGGCATATCAGCAAGCGAT10.9523809523809524No Hit
GTTATAAAGAATGGCCTTGTTCCTACACAATACACAAAGACTTTTTTAGT10.9523809523809524No Hit
TAACAACCCACTTTCAAAGAAAAAGGAGAGTAAGAGACAACATGACCAAG10.9523809523809524No Hit
AGCTGAGACTCCCGTCCCCAGTGGCCGTCCCTGCAAGGCTTATCTCTCCC10.9523809523809524No Hit
TATTTAATGTCAGTGCTCTAATTAGATAGCCTCTCTTATTCAGTCTTTGT10.9523809523809524No Hit
ATACAGACAACACTGTGTAGCTAAATCTTGCCAATTTCATTTTTAATGCT10.9523809523809524No Hit
GGCGGGGGGGGGGGGCGGTATGGGGCTGGTGCCGGCTGTTGGGGTGGGGG10.9523809523809524No Hit
GAATATGATGCCGTTGCAACTACACATTCCTGGATTCCCAAGAGGAATCG10.9523809523809524No Hit
AGCGAAAGCAGGGGAAGTGGGAGAGGGAAAAGGAGAAGGAAGCTTCCCGC10.9523809523809524No Hit
ACACTATGCTTAATTTAATTTTGATTGAAGTGCTGCTCTTGCTTTTCTTT10.9523809523809524No Hit
TTTTTAAACTAGGAAGTCTTACACAGAAAAAGGAAACAATAGTAACAACA10.9523809523809524No Hit
GTCTAAATCTCTTAAATTATTATTTGGATGTTGGACCTACCATTGAGGAC10.9523809523809524No Hit
TTGAAGGACCGGCATGGTTTTTGTGATTTTGGGAAGTGATCCAAGTAAGA10.9523809523809524No Hit
AAGTGATCCTCTCGTCATTGCAGCAAATATCATTGGGATCTTGCACCTGA10.9523809523809524No Hit
TTGTTACTCTAATTTGTCTGGCCCCCAACGAAACTTCGCACCCCTCGTAC10.9523809523809524No Hit
CATATAACCTGCCTTTCAGTCTGGCTATTGAAAATGCTTTATGTTTTTCT10.9523809523809524No Hit
CTCCAAAGCTGGGTAGCTCCATGCTAAAATTAGCCACAAATCCATAGCGA10.9523809523809524No Hit
TTATATACCTTAGGGTAATGAACTGTACTTGTTGTTGGGCCATTCCTATT10.9523809523809524No Hit
ACTGGGGTGCAGTTGAAGCTTTATGGGTTTCTTGTTTGTTAAGAGGTAAG10.9523809523809524No Hit
TTGTAATCACCTGAATCCCTTTGTCAGTCATAAAGAGATTGATTCTGTAA10.9523809523809524No Hit
AAATAATCTTTACTATATCCTCTCGATGAACTCACGACATAACACTTATA10.9523809523809524No Hit
GTCCAATCATAAGTCTGGCGACCTTGAGTTAGTTTATCTACCCTTGTTTG10.9523809523809524No Hit
GTCTCTCCGTGCTGGAGTATTCATCTACTCCCATTTTGCTCACTCTTATC10.9523809523809524No Hit
CCTAGGCACCCCAGCTCTCCAGTTTGAACCAAGGAGTGTGTATTCTGGCT10.9523809523809524No Hit
GTTCGCTTTCAGTACTATGTTCTTTTCCATGATCGCCTGGTCCAATCGCA10.9523809523809524No Hit
ATTTCCGTCTCTTGTCCCTAAGGCAACCAGAAGCCGGGACACTGGATTCG10.9523809523809524No Hit
GGTCAAATATATGTATTATGGAGAGAATAAAAGGTCTGCGAGAGCTAATG10.9523809523809524No Hit
CCTCTAATATAGTCTTCTAAAGCTATAAATTTCTAAGCACTGCTACATCT10.9523809523809524No Hit
AGAGAGGCTATCTAATAAGAGCACGGACATTAAATACGCTGACCAAAGCT10.9523809523809524No Hit
GTAGTATCAAGGTCTCTAATCGGTTAAAGATTACACTGAAGTTCGCTTTC10.9523809523809524No Hit
ACCCGCACATAATCTCACAGTTGTCCTGCAAGGAGTAATATTGTCATCAT10.9523809523809524No Hit
TACACATATAGGTGCCATAGGGGAGACACACAAATTCAGACGAGAAGATC10.9523809523809524No Hit
CAATCAAACAGCTCATGTTTACAGCATCGCACAGGTATGAGGTCACTAGA10.9523809523809524No Hit
TTTCAAATGTCTTAGTTTTCTCTCAGCAGTTTTAAGACCAAAAAGGGCAG10.9523809523809524No Hit
CACAGAAGCTTAATGACTGAGTCATGAAGGCACCCATTAGTAAAAAATTG10.9523809523809524No Hit
GGTCTATTGGGAAAGTGTGCAGGACCTTACTGGCAAAATCTGTATTCAAC10.9523809523809524No Hit
ATATAATCCTTAATGATTCTTCCTGAGGAATATTTTTTTTATTTAAAATT10.9523809523809524No Hit
GTACAGACTTTTTAACAATATTTGTTCATCCAGTTAATGAGCATGGAATG10.9523809523809524No Hit
CCACTATATGATGCAATCAAATGCATGAAGACATTCTTTGGCTGGAAAGA10.9523809523809524No Hit
GATTACCAGACCCAGAAAAGGAACTCAAAACACAGGCGCTCTGAATTGTA10.9523809523809524No Hit
CCTTCGTACAACTTCTTTCCACCCTTCTTCTCTTTTCTGTCACCTTTTGG10.9523809523809524No Hit
ATTTTGGGTAGTCATAAGTCCCATTTTTGACACTTTCCATGCACGTGTTA10.9523809523809524No Hit
GAAAGAGGCTGACTAATTCACAAGACACAGAGATTTCTTTCACAATCACT10.9523809523809524No Hit
GGATGGGCTTGCAGTAGCAAGTGGGCATGACTTTGAAAGGGAAGGGTACT10.9523809523809524No Hit
TCTCTGAGCTGGGGTTCCTCCAAGAGACCTGAAAATGTGCTCAGAGTCCC10.9523809523809524No Hit
CCGATATGTCAAACGCCGATTACCCGGGGAATAGTTATGAGCACTAAGAC10.9523809523809524No Hit
GCATAGAGCCCAAGACAGAAATAGACACCAGAAAGCCCTTCACTACACTT10.9523809523809524No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGG10.9523809523809524No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers