FastQCFastQC Report
Fri 2 Oct 2020
HTGTLBGXG_n02_S1_R1_D09_FD.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHTGTLBGXG_n02_S1_R1_D09_FD.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences102
Sequences flagged as poor quality0
Sequence length151
%GC47

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATTCACATCTTTTCATTCACTGGAGAGGAGATGGCCACCAAAGCGGACT21.9607843137254901No Hit
TCCTTAGACAGAATCAAACTGAGGCACAAGCCGTAGACATATGCAAGGCA10.9803921568627451No Hit
AATAAGCGCACTGACATTAAATACGATGACGAAAGATGCAGAGAGAGGCT10.9803921568627451No Hit
AGGGCGGAGTTTGTGGGTGTGGGCGTGTCTCGTAGGAGCGTCGAGCTGGC10.9803921568627451No Hit
TAGGAGCATAGCATTTCGAGTTTAGGAGAATTGGTATTTTGCTAAGTTTT10.9803921568627451No Hit
ACATTGTGGGATCTTGTGACCATTGAATTTTCACAATTTCCCAGTTCCAG10.9803921568627451No Hit
CTCTAATGCAAGGTTCAACACTTCCCAGAAGGTCTGGTGCCGCAGGTGCT10.9803921568627451No Hit
CAACAGAGGAATGCTCTTTAAAAAAAAAAAAAGGCAAAAAGCTTGGTGTA10.9803921568627451No Hit
GCAGGAGGCTGTGCTCTTCTCTGGTTCAGTGACGTACAACATAGATTACG10.9803921568627451No Hit
GCTCCATGGTATTTTACTCCATTATTTCACTCCTCCCCCTATGATGCAAT10.9803921568627451No Hit
GAATAATGGACATGATTCCAGAGAGGAATGAACAAGGACAAACCCTCTGG10.9803921568627451No Hit
CACCTGGGCCCTGTTGCCATGCTTGACACTGCTCGCTCTACTTCCATGAT10.9803921568627451No Hit
AACTTATACAATATACGGAATCTTCACATTCCTGAAGTCTGCTTAAAATG10.9803921568627451No Hit
ATCTGATACTAATAGCCCTACCTTTGATTGGGTTTGATCCCACAGCTTCT10.9803921568627451No Hit
TCTGTAAACAATGCTGTGGTAATGCCAGCCCATGGTCCAGCCAAAAGCAT10.9803921568627451No Hit
GAATGCACCAAACCATGAGGGAATACAAGCAGGAGTGGACAGATTCTACA10.9803921568627451No Hit
AAGCAGGCAAGTGGGAGTTCAGAGCGGAGCACAGTTGCTGAGAGGGTCGG10.9803921568627451No Hit
TTGGTTGTTGGTACAGAGTGTTCGTTGAGTGACAAGAGTAGTGGGCAGGG10.9803921568627451No Hit
CACACCCACACACACACAGAAAGAAAATGTCGTCAGGCTTAGGGAGGAGT10.9803921568627451No Hit
ATACTACTGAACAGTCTTGTTAAACTTGTTCAAAATAATAGTGTTAAATC10.9803921568627451No Hit
CTTTCCATCATTCTTATAACTTCTGTTCGCATGTCAGATGTCCGTCCTTC10.9803921568627451No Hit
CATGAAGAGAACAAGCCAATTGAAGTGGGCACTCGGTGAAAATATGGCAC10.9803921568627451No Hit
GCATTGGCCAACACCATAGAAGTCGTTAGATCGAATGGCCTAACCGCTAA10.9803921568627451No Hit
CACTTGGCCTATCGCAGTCCTCAAGAGCATGTCTCCTATTTCAAGAACAC10.9803921568627451No Hit
GTAGAAACAAGGTCGTATATAAACAATACGACACTAATTGATGCCCATCA10.9803921568627451No Hit
ATTTCATCTTGATCTTGGAGGTTCCATTGGTTCTGACCACATATGTGAGG10.9803921568627451No Hit
GTACTATTGTCTCCCGATGCAGTCAGTGAAACGCAAGGAACTGAGAAGTT10.9803921568627451No Hit
GGCAAGGGTGGATCCAGGTGTTCAAATGATGTCTTTGGGATTCTGACTCT10.9803921568627451No Hit
ATCTTCAGTCAATGCACCTGCATCCTTTCCAAGAACTGTAAGTCGTTTGG10.9803921568627451No Hit
ACTACTTCCTCTATCCCACACCTTTGACCTCAGTGACCCAGCGCAGGTTT10.9803921568627451No Hit
CATGACAGCTGATTCATTTACTCCAGAAACTCCAAAGCTGGGTAGCTCCA10.9803921568627451No Hit
CCAGAGGATGAAGGGACTTGATAAGCTTCCTAGGAGGCCTCATGTAATCC10.9803921568627451No Hit
AATCATAAGTCTGGCGACCTTGAGTTAGTTTATCTACCCTTGTTTGTTGA10.9803921568627451No Hit
GCTTCATACAGGAGTTGGAGCACGGACTGAGTACAGATGTAGGGGAGAAA10.9803921568627451No Hit
GCGAAAGGCGAAGAGAGGACCGAAATGTTACAAATAGTCACAACCACAAC10.9803921568627451No Hit
GGACAGTGGTTACGTGTGATTCGGTCGCTGTGGAAGGGTGTCGTAGATAG10.9803921568627451No Hit
GGTCTGCTGACACTGCTGCTCTTCTTACTATGTTTCTAGCAGCGATAATC10.9803921568627451No Hit
CCCTTGGGTTAAGTGCAACACTTCAATATAAACACTGCCTGTTCCGCCGG10.9803921568627451No Hit
AGCCCCTAGAACACAGTCTGTTTGTGCATACCCACTTGGTTCATTATCCT10.9803921568627451No Hit
GATGAGTCCACACACCCACAGATGAGGATTAACGGTGAAGCAGGTAAGGG10.9803921568627451No Hit
TTCTTGATCCGTCCAGACTCGAAGTCGACCCTGGCATCAATCCGGGCCCT10.9803921568627451No Hit
CTCCTGCTTGCTTCACATCACTCACCCATGAGCTTTATCCATCTTGCACA10.9803921568627451No Hit
ATACTGTTCACCACTGTCCAGGCCATGATTCGGTCTCTTCCTTCAATTAT10.9803921568627451No Hit
TTGCAACACATCTGGTACATCTTATCCTCATCAAGAAGTACCACTTGGAT10.9803921568627451No Hit
GTTCCGCCGGCTACTGGGAGAAACCTTGTGTTACGGACCAATTCTCTTTC10.9803921568627451No Hit
GTTGATATTATTTCCACATAGGTCCCATTGTCTAAATAACAATGCATATT10.9803921568627451No Hit
GCACTGAAGCAATCAGACTGAAGGTTGGTATAATACAGGTCACGGGTATG10.9803921568627451No Hit
AGCACTGACTCAGGGCCATTGATCTCCCACATCATTGATGACGAATAAGT10.9803921568627451No Hit
GGCCAAGGGTGTTGCCTCTTCCTTTTAAGGACTTTTGATCTCGGAGGAGC10.9803921568627451No Hit
GCAATTGAATACTCCTGGAGCTCTTCTATCTTCTCTTTTCTTATTGCCAG10.9803921568627451No Hit
GACCTGAGCTGAAGGAGGACTTCACTGACTGAGACACACAGGCACACCAC10.9803921568627451No Hit
CCCTCAGATTGCCTGATGGGCCTCTTTGCCATCAGCGGTCAAAGTTCCTG10.9803921568627451No Hit
CCTTTCTGCCACTGTCCAGCGCCTTCAGACTTCCGCTGGAAAGCAGATGG10.9803921568627451No Hit
CAACACGGGGATACAACTCATGACCCAGAGATCAAGATCTGTATGCTGTA10.9803921568627451No Hit
TATTTTCTCAACTGGAATATCTTAATTGGCTGAATACACTCAAGGATCAC10.9803921568627451No Hit
TTCCATTCCAGAGGACAAGTTACCGGTGGTGCTATCCATAAAGAAGAGAG10.9803921568627451No Hit
GGACTAAACTGCGCAGTCAAGAATAGTAAGTCATCTGTTTGGGTTCATCC10.9803921568627451No Hit
TCGCAGTCCCGCACTCGCGAGATACTCACTAAGACCACTGTGGCCCATAT10.9803921568627451No Hit
CTCCCATTTTGCTGACTCTTATCCCTCTCAGCGACATCTCCGTGCTTGGG10.9803921568627451No Hit
GTATAGAGGTCATACCAATATTGTTCTTCCACTCCTAGAGGATGGCTTGT10.9803921568627451No Hit
GAACTTGATGAAATAGGAGAAGCTGTTGCGCCGAGTGAACATATCGCAAG10.9803921568627451No Hit
GATGCTAATATATGCTCAAATGAAGAGAGAACAGTGTAATGAATCTCCGT10.9803921568627451No Hit
GCCAAGAATACTGACATCACAGTCCCAGCTGGCAAAAACAACAGAGAAGA10.9803921568627451No Hit
GTTTAGGATACGATTACGTGAAAACACGAAAAAAATACAAAATACACACT10.9803921568627451No Hit
GTTAATCAACAGATGATAAATCTTATGTACCATGGAGTATGTTTCTGCTC10.9803921568627451No Hit
TTCTTAAAGGATGTAATGGAATCAATGAACAAAGTGGAAATAGAGATAAC10.9803921568627451No Hit
TCTGTAAACAATGCTGTGGTCATGCCCGCCCATGGTCCGGCCAACAGCAT10.9803921568627451No Hit
GAGTAACACGGAGGGCCGTCGCCATATATTACGTAGCGCGCGCCAACAAC10.9803921568627451No Hit
GCACACGCTCCGTTGGTGGGCAGAGCCTTGGGACAGGAGGAACGTGCACG10.9803921568627451No Hit
ATTTGACACTGTCCAAATAATAAAACTTCTCCCCTTTGCTGCTGGCCCCC10.9803921568627451No Hit
CCTGGGGGCGGGGGGGGCGGGGGGGCGGGGTGCCCGGTGGGGGCGGGGCG10.9803921568627451No Hit
CCCTACCACTCTCTCCGTGCTGGAGTATTCATCTACTCCCATTTTGCTGC10.9803921568627451No Hit
CCGTGAGTGAGTTTATCAACCCGTGTTAGTTGAACAACTTCCATTGGTTC10.9803921568627451No Hit
ATCTTCTCCCACCCATGGTGAATTCGTCATACCCTTCATGTACGATTATG10.9803921568627451No Hit
TGCCGTGAGTTTCTGACCTCGGCACCGGCGCAGTGTTGGTGGTGGGCTCC10.9803921568627451No Hit
GGTGCATGGGGTGGCACATTTAGGGACATGGGCCGCGCCCCGGGGGCTAT10.9803921568627451No Hit
GTTCACAAGTGGCACACACTAGACCAAAAGCAGCTTCTGTGGTCACTGTT10.9803921568627451No Hit
GTGTTGACCTGAAAACACTGTACTTTCTTTTAGAAGATGGCCCCTCCAGG10.9803921568627451No Hit
CTCTTGTTTTCAGTGTTTGGAGGTTGCCAGTTAGCACTTCTTCTTCTTTC10.9803921568627451No Hit
CCCATATGGAACATATTAGTGTATCTCTAGTCTTTGATCAACAATTGAAG10.9803921568627451No Hit
CCACAAAGCAGCTCGGTGGGAGGCAGGTCTCTGGCATTTGGCGATTATTG10.9803921568627451No Hit
GTAGAAACAAGGGTCCAGAGTCCATCAAAGTCCAAGTGCCCAACATGCAG10.9803921568627451No Hit
GTATGCTAGCGTCCCGGTTAACTATGGAATACAAACCTACGTCCCCTTGC10.9803921568627451No Hit
CTTTGTAATCATACAAATCAGGAAGAAATTTAGGCTTCTCTACCCCTGTT10.9803921568627451No Hit
GAGCAGGGAGACCGATGCAGGGCTTGCTCCACGCCCCCGGGGAGCAGGAC10.9803921568627451No Hit
GCCCTGCAAAGGCTGCAGCACCTGGTGGGGGAAACTACCCTTAACCGAGA10.9803921568627451No Hit
CCTATATGTGAGAACCAATGGAACCTCCAAGATCAAGATGAAATGGGGCA10.9803921568627451No Hit
ATCAACATAGGCTCTAAAGTTTTAAAGGCTGGGGAAGTTCGGTGGGAGAC10.9803921568627451No Hit
ACACTTGACAGAGTGCTGCCATGAGAAATACGCAGCGTGTAAACCTCAGG10.9803921568627451No Hit
GTCCTTCTGACCTGGCTATTCAGCGGCTTAACCCCACCCAACCCCATCCA10.9803921568627451No Hit
GAACTTGGCGAGGTCAGAAAGGAGGGGGATAATAACTTGAGCGCTTGGGA10.9803921568627451No Hit
GTGAAGTTCACCCGAGGTCCCGACAACTATTTCAGCCCCGGGAAAGCATT10.9803921568627451No Hit
GTTTTATATACCTTAGGGTAATGAGCTGTACTTGTTGTTGGGCCAGTCCT10.9803921568627451No Hit
GTTGCTATCATTGTCCTGTGAGGCCCAAGTCCCGACAGAGTTAACATGGC10.9803921568627451No Hit
GGGTTCATTATAAAAGGAAGGTCTCATTTGAGAAATGATACTGATGTGGT10.9803921568627451No Hit
CTTATACTGGAGATACTCCATACAGCCATGGAACAGGTACAGGATACACA10.9803921568627451No Hit
GATACGGCCAGAGCTGATACAATCACTCGGTCTGATACAGCATCGATAGT10.9803921568627451No Hit
CATCAGGAAGGCAAGAGAAGAACCCCGCACTCAGAATGAAGTGGATGATG10.9803921568627451No Hit
GGAGGGACCTGGAGTGACCAGGACCAGCAGCGGGCGAGTCACTGCTGATG10.9803921568627451No Hit
GAAAAAAAAATTCCCGGTGGAACGATCACTGTTCCTGGGACAGTTTAGAA10.9803921568627451No Hit
GGCTAATGTGCTAATTGGGCAAGGGGACGTAGTGTTGGTAATGAAACGAA10.9803921568627451No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers